Thiothrix lacustris: RCF98_17010
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Entry
RCF98_17010 CDS
T09396
Name
(GenBank) proline--tRNA ligase
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
tlc
Thiothrix lacustris
Pathway
tlc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RCF98_17010
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tlc01007
]
RCF98_17010
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tlc03016
]
RCF98_17010
Enzymes [BR:
tlc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
RCF98_17010
Amino acid related enzymes [BR:
tlc01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
RCF98_17010
Transfer RNA biogenesis [BR:
tlc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RCF98_17010
Prokaryotic type
RCF98_17010
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
tRNA_edit
HGTP_anticodon
TIR_2
Motif
Other DBs
NCBI-ProteinID:
WML90656
UniProt:
A0ABY9MPR5
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Position
complement(3502576..3504285)
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AA seq
569 aa
AA seq
DB search
MRVSRFPLTTLRETPADAEVISHQLMLRAGMIRRLASGLYTWMPYGLRVLRKVEAIVREE
MNNAGAIEVLMPSIQPAELWQESGRWEKYGAELLRIRDRHQRDFCYGPTHEEIITDYARK
ELSSYKQLPINFYQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHATQESLQETYDTMFAA
YSRIFQRLGLDFRPVQADTGSIGGNASHEFHVLADSGEDAIAFASGSNYAANIELAEAVC
LIAERAAPTEAMREVDTPNAKTIEELVEQFSLPIEKTVKTLIVAAAEDAEVDFIALLVRG
DHTLNEIKAEKIPGVAVPLRFAREDEIRPLIGAGPGSLGPVGLKIPVIADRTVANMADFS
AGANSDGKHYFGINWERDVALPQIADLRNVIEGDPSPDGCGTLSIMRGIEVGHIFQLGKT
YSEKLNATVLDENGRAQVMTMGCYGIGVSRVVASAIEQNNDENGIRWPAAIAPFTVVIAP
LNMQKSPDVAAKAEELYAQLQAAGVDVLLDDRALRPGAMFADHELVGIPHRVIISERGLQ
AGEIEYKARSGGDAVKVPVAEILAFVQGL
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtttcccgattccccctgaccaccctgcgtgaaacgccagcggatgccgaagtc
atcagccaccaattaatgctgcgggcaggcatgatccgccgtcttgcttccggcctgtat
acgtggatgccgtatggcttgcgggtattgcgcaaggtcgaagccatcgtgcgcgaagaa
atgaacaatgccggagccattgaagtgctgatgccctccatccaaccggcagaactgtgg
caggaatccgggcgctgggaaaagtacggggcggaactgttgcgcatccgtgaccgccat
cagcgtgatttctgctacggccccacgcacgaagaaatcatcaccgattacgcccgcaag
gaattgagcagctacaagcagttgccgatcaatttctaccagatccagacaaaattccgt
gacgaagttcgcccacgtttcggagtgatgcgtgcacgggaattcctgatgaaggatgcc
tactccttccacgcgacgcaggaatccttgcaggaaacttacgacaccatgttcgcggct
tactcgcgcatcttccaacggctgggcttggatttccgcccggtacaagcggataccggc
tcaatcggtggtaatgcctcgcacgaattccacgtccttgccgattccggggaagacgcg
attgccttcgccagtggcagcaactacgcggccaatatcgagctagcggaagccgtttgc
ctgatcgccgaacgtgccgccccaacggaagcaatgcgcgaagtcgacacccccaatgcc
aaaaccatcgaagaactggtggaacaattcagcctgcctatcgaaaaaaccgtcaaaacc
ctgatcgtggcagcggcggaggatgctgaagtcgacttcatcgccctgttggtgcgtggc
gaccataccttgaacgaaatcaaggcggaaaaaatccccggcgttgccgtacccttgcgc
tttgctcgtgaagatgaaatccgcccactgattggtgcaggccccggttctttaggccct
gtcggcttgaaaattccggtaatcgctgaccgtactgtcgccaatatggctgacttcagc
gcaggtgcaaatagcgatggcaagcactatttcgggatcaactgggaacgcgatgtcgcc
ctgccccagattgccgatttgcgtaatgtgatcgaaggcgaccccagcccggatggttgt
ggcacactgtccatcatgcgtggtatcgaagtcggacacattttccaattgggcaaaacc
tattcggaaaaactcaatgctaccgtgctggacgaaaatgggcgggcgcaagtcatgacc
atgggttgctacggcatcggcgtttcccgcgtcgtcgcttctgcgattgagcagaacaac
gacgaaaacggcattcgctggcctgcggcgattgcaccgttcaccgtagtgattgcacct
ctgaatatgcagaaatcgcctgatgtagcggcgaaagcggaagaactgtacgcacaactg
caagcagcaggcgtggatgtgttgctggatgaccgtgcattacgccccggcgcgatgttt
gctgaccacgagctggtgggcattccgcatcgggtcatcatttctgagcgtggcttacaa
gccggagagattgaatacaaggcgcggagtggcggtgatgcggtgaaagtgccggttgcc
gagattctggcgtttgttcaagggttgtaa
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