KEGG   Thiothrix lacustris: RCF98_17095
Entry
RCF98_17095       CDS       T09396                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
tlc  Thiothrix lacustris
Pathway
tlc00010  Glycolysis / Gluconeogenesis
tlc00020  Citrate cycle (TCA cycle)
tlc00260  Glycine, serine and threonine metabolism
tlc00280  Valine, leucine and isoleucine degradation
tlc00310  Lysine degradation
tlc00380  Tryptophan metabolism
tlc00620  Pyruvate metabolism
tlc00630  Glyoxylate and dicarboxylate metabolism
tlc00640  Propanoate metabolism
tlc00670  One carbon pool by folate
tlc00785  Lipoic acid metabolism
tlc01100  Metabolic pathways
tlc01110  Biosynthesis of secondary metabolites
tlc01120  Microbial metabolism in diverse environments
tlc01200  Carbon metabolism
tlc01210  2-Oxocarboxylic acid metabolism
tlc01240  Biosynthesis of cofactors
Module
tlc_M00009  Citrate cycle (TCA cycle, Krebs cycle)
tlc_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
tlc_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
tlc_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:tlc00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    RCF98_17095 (lpdA)
   00020 Citrate cycle (TCA cycle)
    RCF98_17095 (lpdA)
   00620 Pyruvate metabolism
    RCF98_17095 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    RCF98_17095 (lpdA)
   00640 Propanoate metabolism
    RCF98_17095 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RCF98_17095 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    RCF98_17095 (lpdA)
   00310 Lysine degradation
    RCF98_17095 (lpdA)
   00380 Tryptophan metabolism
    RCF98_17095 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    RCF98_17095 (lpdA)
   00670 One carbon pool by folate
    RCF98_17095 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tlc04147]
    RCF98_17095 (lpdA)
Enzymes [BR:tlc01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     RCF98_17095 (lpdA)
Exosome [BR:tlc04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   RCF98_17095 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Biotin_lipoyl FAD_oxidored Pyr_redox_3 NAD_binding_8 BSH_YknX AlaDh_PNT_C BSH_RND GIDA FAD_binding_2 HI0933_like GCV_H Thi4 BSH_CzcB Lycopene_cycl BSH_YhbJ BSH_CusB 3HCDH_N Leu_Phe_trans_N DAO FAD_binding_3
Other DBs
NCBI-ProteinID: WML90672
UniProt: A0ABY9MQ22
LinkDB
Position
3527267..3529036
AA seq 589 aa
MSTIIEVKVPDIGSFKDVEIIEVLVDAGFKIEAEDSLITIESDKSSMEIPSPMAGTVKQM
LVKVGDRVSEGSVLLMLEVAEEGETPHPPTPSPSRGEGEQESPSSFPSPLEGEGLGVRGS
SIETELVVLGSGPGGYTAAFRAADLGKKVVLIERYPNIGGVCLNVGCIPSKALLHTAEVI
EEAKEFAKHGVKFGEPDIDLAAVRAHKSDVVSKLTTGLKGLAKQRKVQIVQGYGRFTSAH
TLEVEAADGSKQTVKFANCIIAAGSRVTKLPFIPWDDPRVMDSTAALELQEIPKRLLVVG
GGIIGLEMATVYHALGASVTVVELSPGLMPGADRDIVKPLHNKIKGQYEAIYLNTKVTAI
EPTAAGLVCSFEGKGAPEKDTFDRVLVAIGRSPNGDLIDAGKAGVFAGARGFIPVDNQMR
TNVPHIFAIGDIVGQPMLAHKATHEGKVAAEVIAGHKAYFDAKTIPSVAYTNPEVAWMGK
TEEQCKAEGIAYEKGAFPWAASGRALSMDASNGITKVLFDKETGRLIGAGIAGKSAGELI
AEAVLALEMGADAHDIGLTIHPHPTLSETLNFAAEVAEGTCTDIYAPKK
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgagcacgataatcgaagtcaaagtccccgacattggtagcttcaaggatgtggaaatc
atcgaagtgctggtcgacgctggtttcaagatcgaagcggaagattcgctgattaccatt
gaatccgacaaatcctcgatggaaatccctagccccatggcgggcactgtcaagcagatg
ctggtgaaggtgggggatcgggtgtcggaagggtcggtgttgttgatgctggaagtggcg
gaagagggggaaacccctcaccccccaaccccctctccctcaaggggcgagggggagcaa
gagtctccttcttcgttcccctctccccttgagggagaggggctaggggtgaggggttct
tcaattgaaaccgaactcgttgtgctcggctctggccccggcggctacaccgctgcgttc
cgcgcggctgatctcggcaagaaagtggtgctgatcgagcgttaccctaatatcggcggg
gtgtgcttgaacgtgggttgtatcccgtccaaagccttgctgcataccgctgaagtgatt
gaagaggctaaggaatttgccaagcatggggtgaaattcggtgagccggacatcgacctc
gctgcggtacgggcgcacaaaagcgatgtggtcagcaagttgaccacgggtctgaaaggg
ctggcaaagcagcgtaaggtgcagatcgtgcagggttatggtcgtttcacctctgcgcac
acgcttgaggtggaggcggcagacggcagcaagcaaacggttaagtttgccaattgcatc
attgcggcgggttcgcgtgttaccaaattgccgtttattccgtgggatgatccgcgtgtg
atggattccaccgctgcgttggaattacaggaaatccccaagcgtttgctggtggttggt
ggtggcattatcgggctggaaatggccacggtttaccacgcgctgggcgcgagtgtgacg
gtggtggagctttcccccggtttgatgcccggtgctgaccgcgacatcgtgaagcctttg
cacaataagatcaaaggccagtacgaagccatttacctcaataccaaggtcacggcgatt
gagccgacggcggcagggttggtgtgttcgtttgaaggcaagggtgcgcccgaaaaggat
acctttgaccgggtgctggtcgcgattgggcgtagccccaacggtgatctgatcgacgcg
ggtaaggcgggtgtcttcgcgggcgctcgcgggtttattccggtggataaccaaatgcgt
accaatgtgccgcacattttcgcgattggcgacatcgtggggcaaccgatgctggcgcac
aaagccacgcacgaaggcaaagtggcggcggaagtgattgccgggcacaaggcgtatttc
gatgcgaaaaccattccatcggtggcttacaccaacccggaagtggcgtggatgggtaag
actgaagagcagtgcaaggctgaggggattgcgtatgaaaaaggcgcgttcccgtgggca
gcgagtgggcgggctttgtcgatggatgccagcaacggcattactaaagtgctgtttgac
aaggaaaccgggcggctgattggcgcgggcattgcgggtaagagtgccggtgagctgatt
gctgaggcggtgttggcgctggaaatgggtgcggatgcgcatgacatcggcttgactatc
cacccgcatccgacgctttccgagacgctgaactttgcggcggaagtggcagaagggact
tgcacggatatttacgcgccgaagaagtaa

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