Thiothrix lacustris: RCF98_17335
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Entry
RCF98_17335 CDS
T09396
Name
(GenBank) SNF2-related protein
Organism
tlc
Thiothrix lacustris
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SNF2_assoc
DEAD
HDA2-3
Motif
Other DBs
NCBI-ProteinID:
WML90715
UniProt:
A0ABY9MPY6
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Position
complement(3576059..3579472)
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AA seq
1137 aa
AA seq
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MHLTAKYLDLLADNHLPQTVLFNVFDTTTIERGIDYCETGKVTHFRAEKSGNGNISITAK
VQGSGEEPYVTVVNYNEHSPRWVTGVCTCPVTMACKHAVATLFEYLDHARKQKAKEPQRK
AVPAFMAATMPTARAATHSPVDLWLQSLSNADKPSLPALEGEADINNTHLLYLLDIDAYE
HPSLSLYKANVLKKGGYGKPSHVQLEALLTPYRARNFGYEPHDLMIAQLLAMPGMRFLHH
WNKGTLNGKTGEQVLLEILKTGRAFWANVDTWQRDIQPLHWGKSLEFQFEWQKNNDAFTV
SLTPERPITRYFWLNNKLWYIDTETQTCGWLQHPDLSFAQVEKFLNAPPIPTEQAERVSE
RLLEVLPDAEIPAPSLKVHQQIEDVHATPIPDLYLRTVTLPETGLETHIASLRFHYADKL
LQPAQHKPSTLLKTGKQRYRIHRDLDAEQQALDTLEDYGFETAHNRFPDLHRLELLMHPD
SPALTALRWNDFLDHGIEALRADGWNVTLDDAFDLNFDIVGDLDAAWEESANGNDWFEIS
LGFEVEGQRINLLPILVDMLGQMESPQALRDLLERQPYIFVPLSGNRWAKLESQRLGGIL
DTLVELYDHQPLNANGNLELSKYQGTALGALLNAPGMKWKGAEELLILTQKLQDFQGIQA
ITLPEGLNAELRHYQHDGLNWLQFLREYQFNGILADDMGLGKTLQTLAHLLIEKQTGRLE
QPALVIAPTSLMGNWRREAARFTPDLRVLVIHGNERHKHFEHLGEYDLILTTYPLIVRDE
EQYLRHTFHYLILDEAQAIKNAASRTTQVIYTLKARHRLCLTGTPLENHLGELWSMYHFL
MPGFLGAHDKFTRLFRTPIEKQGDVGRQQQLRQRVLPFMLRRTKELVASELPPKTEIIRS
VALEGKQRDLYETVRLAMDTKLQEEIGKKGFARSHIMILDALLKLRQVCCDPRLVKLDKA
AKVKQSAKLELLMTLLPEMLEEGRKVLLFSQFTSMLALIEEELIASKIAYTKLTGQTKNR
DEVIADFQEGDAKVFLISLKAGGTGLNLTAADTVIHYDPWWNPAAEQQATDRAYRIGQDK
PVFVYKLITEDTVEEKILKLQEKKQMLANSLYSEAGAQESVRFSSEDLMDLLKPLEQ
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgcacctaacagccaaatacctcgacctacttgctgacaatcatcttccccaaactgtt
ctgttcaatgttttcgataccacgaccatcgaacgtggcattgattattgtgaaacggga
aaagtcactcattttcgggcagaaaaaagtggcaatggtaacatttctatcacagccaaa
gtgcagggtagcggtgaagaaccttatgtcacggtagtcaactacaacgagcactccccg
cgttgggtgactggcgtttgtacatgccctgtcaccatggcctgtaaacacgccgttgcc
accctgtttgaatacctcgaccacgctcgaaaacaaaaagccaaagaacctcaacgcaaa
gctgttcccgcttttatggccgcaaccatgccgacagccagagcagcaacacactcccct
gtcgatttatggctgcaatcattaagcaatgcggataaaccctctctcccagccttggag
ggtgaggccgacattaacaacacccatttgctttacctacttgacatagatgcctacgaa
caccccagtttgagcctatacaaagccaatgtgctgaaaaaaggcggttatggcaaaccc
tcccacgtccaactagaagccctcctaaccccttaccgcgcccgcaatttcggttacgaa
cctcacgacctgatgattgcccaactgctcgcgatgccaggaatgcgctttttgcatcac
tggaacaaaggcactttaaacggtaaaactggcgaacaagtacttctcgaaattctcaaa
actgggcgagcattctgggcaaatgtcgacacatggcaacgcgatatacaaccgctgcat
tggggaaagtcgctagaattccaatttgaatggcaaaaaaataacgacgcattcacggtc
agcctaacccctgaacgccctatcacccgctatttttggctcaataacaagctctggtac
attgacacggaaacacaaacatgcggctggttacaacaccctgaccttagcttcgcacaa
gttgaaaaattcctaaatgcaccacccattcccaccgaacaagccgagcgcgtcagcgaa
cgcttactagaagtgctacccgatgctgaaattcccgctccatccctaaaggtgcaccag
caaatcgaagatgtgcacgcgacacccatacctgacctgtacctacgcaccgtcacgctg
ccggaaaccggccttgaaactcacattgccagcctgcgcttccattacgctgacaagctg
ctacagcccgcccaacacaagcccagcaccttgttgaaaacgggcaaacaacgctaccgc
atccaccgcgaccttgacgctgaacaacaagcactcgacacccttgaggactacggtttt
gaaacagcccacaaccgatttcctgacctacaccgtcttgaactgctaatgcacccggac
tccccagcactgacagcactacgctggaatgatttcctcgaccacgggatagaggcgctg
cgggcggacggctggaacgtcacgctggatgacgcctttgacctgaattttgatatcgtc
ggcgacctcgatgccgcgtgggaggaaagtgccaacggcaacgactggtttgaaatcagc
ctcggctttgaggtggaaggccagcgtattaacctgctgccaattctggtcgacatgctc
gggcaaatggaaagcccacaagccttgcgtgatttactggaacgccagccctacattttc
gtaccgctatccggcaaccgctgggccaaactcgaatcacagcgcctgggtggaatcctc
gacacgctggtcgaactctacgaccaccagccactcaatgccaacggcaatctggaactc
agcaaataccaagggacggcactgggcgcactgctcaacgcccccggcatgaaatggaaa
ggcgcggaagaactcctcatcctcacccagaaattgcaggatttccaaggtattcaagcc
attacactaccggaaggtttgaatgccgaattgcgccattaccagcacgacggcttgaac
tggctacaattcctgcgcgaataccagttcaacggcatcctcgccgacgacatgggcttg
ggcaaaaccctgcaaaccctcgcgcacttactgatagaaaagcagaccgggcgactggaa
cagcccgcgctggtcatcgctcccaccagcctgatggggaactggcgccgcgaagcagct
cgcttcactcctgatttgcgggtgctagtcatccacggtaatgagcgtcacaagcacttt
gagcatctgggtgaatatgacctgatcctcaccacttacccgctgatcgtgcgtgatgaa
gaacaatacctgcgccacaccttccactacctgatactggatgaagcccaagccatcaag
aatgcggcttcacgtaccacccaagtgatttacaccctcaaagcacgccaccgcttgtgc
ctgaccggcacaccactggaaaaccacctcggcgaattatggtcaatgtaccacttcctg
atgcccggctttttgggtgcgcacgacaaatttactcgcctgttccgcaccccgattgaa
aaacagggcgatgtaggcaggcaacagcaattgcgccagcgggtattgcccttcatgtta
cgtcgtaccaaggaactggttgccagcgaattgccccccaaaaccgagatcatccgcagc
gtggcactcgaaggcaaacaacgcgacctatacgaaaccgtgcgcctcgcgatggacacc
aagttacaggaagaaatcggcaaaaaaggtttcgcccgcagccatatcatgattctcgac
gcactactgaaattacgccaagtctgctgcgacccacgtttggtcaagctcgacaaagca
gccaaggtcaaacagtccgccaaactcgaactgctgatgaccttattgccagaaatgctc
gaagaaggccgcaaggtcttgctgttctcgcaattcacctcgatgttagctttgatcgaa
gaagaactgattgcctcaaaaattgcatacaccaaattgaccgggcaaaccaaaaaccgc
gatgaagtcattgccgactttcaggaaggcgatgccaaagtattcctgatcagcctcaaa
gcaggcggtaccgggctaaacctcaccgctgccgacaccgttattcattacgacccgtgg
tggaacccagcggcggaacagcaagccaccgaccgcgcttaccgcatcggtcaggacaaa
cccgtattcgtctataaactgattacggaagacacagtggaggaaaaaatcctcaagctg
caagagaaaaagcagatgttggccaatagcctgtactcagaagctggagcgcaagaaagc
gtgcgcttcagctctgaagacttgatggacttactgaaaccgctggagcagtga
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integrated database retrieval system
