Pseudothermotoga lettingae: Tlet_0197
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Entry
Tlet_0197 CDS
T00618
Name
(GenBank) metal dependent phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
tle
Pseudothermotoga lettingae
Brite
KEGG Orthology (KO) [BR:
tle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tle03019
]
Tlet_0197
Messenger RNA biogenesis [BR:
tle03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Tlet_0197
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
tRNA_anti_2
Cas3_HD
HDOD
Motif
Other DBs
NCBI-ProteinID:
ABV32767
UniProt:
A8F3N3
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All DBs
Position
complement(198887..199939)
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AA seq
350 aa
AA seq
DB search
MKLGDRIPKEIFNELKPSKEPDFPYLEDLGSKVNENVQVIAKVTSRKLQEARDQKKFLLM
TLSDKTGSIRAIDWYNADENFLKINDGDVVVARGRIVYFEDHIQLNLEKSADSIKNLNDS
EYDFRRFLEVTSRDIDKMYEKLIVFVKEISDSDLKKLLEKIFIEDTEFVKLFVQCPAGVS
VHHAYIGGLLEHTVDVVSSCKKIWQVYDSMLNKDLLLAGAMIHDIGKVREYRVTQKGFEV
TTEGELKGHIVLGVEAIREVAYKIGLTGSKLLHLEHIILSHHGEIEWGSPVVPKTAEAFV
IHSLENMDAKLARFRYLQEKGKKNGNEKIWTDYDRHLQRRLWLGGQENED
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacttggagataggattccaaaagaaatttttaacgaactcaagccgagtaaggaa
cctgattttccatatctcgaggacttaggcagcaaagtaaatgaaaatgtccaggtcata
gctaaggtaacaagcagaaaacttcaagaggcccgggatcagaaaaagtttctcctcatg
actttatcagataaaacaggtagtatcagggcaatagactggtataatgcggatgagaat
ttcttgaaaataaacgatggagatgtagtggttgccaggggaaggatagtctattttgaa
gatcatatacagttgaatctcgagaaatctgctgactctataaaaaatttgaatgattca
gaatacgattttcgcagatttttggaagtaacatcgcgtgatatagataaaatgtatgag
aaattgatagtctttgtcaaagaaatctcggattctgatttgaaaaagttgctggaaaag
attttcattgaggatacagagtttgtcaaattgtttgttcaatgcccagcgggggtgagt
gtacatcatgcatacatcggaggattgcttgaacacactgtagatgttgtgagctcgtgc
aagaaaatctggcaagtgtatgattctatgctaaacaaagatcttctgctcgctggcgcg
atgattcacgatattggaaaagtcagagaatacagagtaactcagaaaggctttgaagtc
acaactgaaggcgagttgaaaggacacatagtacttggagtcgaggcaatcagagaagtc
gcttataaaattggtctaaccggaagtaaattacttcaccttgaacatataattctttct
catcatggtgaaattgaatgggggtcgcctgtggttccaaaaacagctgaggcttttgtt
attcattccctcgaaaatatggatgcaaagcttgcaagattcagatatttgcaggaaaag
ggtaagaaaaatgggaacgagaaaatctggacagattatgataggcaccttcaaagacgc
ctttggctgggagggcaagaaaatgaagattaa
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