Pseudothermotoga lettingae: Tlet_0413
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Entry
Tlet_0413 CDS
T00618
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tle
Pseudothermotoga lettingae
Brite
KEGG Orthology (KO) [BR:
tle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tle03400
]
Tlet_0413
DNA repair and recombination proteins [BR:
tle03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Tlet_0413
Archaeal homologous recombinant proteins
Tlet_0413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
SbcC_Walker_B
SMC_N
AAA_27
AAA_29
AAA_21
CENP-F_leu_zip
DUF948
ABC_ATPase
ABC_tran
RsgA_GTPase
TPR_MLP1_2
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ABV32980
UniProt:
A8F496
LinkDB
All DBs
Position
complement(442408..444972)
Genome browser
AA seq
854 aa
AA seq
DB search
MSKLRPLTIEIENFLGIKKCNLSFKDGVFLIIGQNGAGKSSLLEAIVFALYGTGVRYGKK
SPSEYIRSRSSSCQIKFSFLRNGKKYEVIRRIKASGGSEASLSENNAVVTTHRTLVDKEL
RKIMDISYDSFITTFFLPQGRAAHLLTARRSEINDIVFDVISPKKTIKAMQEKISEIVRK
LESEHEKYQARLADFRGRLEKLSSQNPHKQISELTNAIQNLSGKIDIKQKELKQIEKEKD
LWNEINQIEKTLENLEKKKHRVLEEAEEEKKISLAKSLGAEYQIFLTSKKQMESLKDDAK
VLEKQINSLEYEFKKVNTQLEQLFTKQQDIDKRISQSTSELEKLQKIDIESNELLKKLNE
LKAVKLRISKDIDDLQNSLNKTQDLIEEKQRLLFQKQKQFFEQESEFNQIKQKAIIHMAQ
EIAQTLQDGDICPVCGNSYKKSEFSTTVEEKIEKYEYLKKAIEMLSKEIDQIQFELKNLL
EEKENLTRKLLETQDDLSLHEEEISTVSKKLLQIGYSDDLKSKIHNLSKQIQNAMNNKIT
VQSEISQLKERSDQINKRISELKERLKKNSEQQEKTAKELRSNKEKFFEKLGEINFTLEQ
FESYFKKQLPTHSAVQVLQKIESEIVYNKEKLTQLRNLTKISAQQCESLFAELNNTVELL
KKQRDNFIRQKAVMEHLIKELEEIRREKENLERIFNQIHKEYQIAQSVKSTFSAREFQSY
IAKIVLENILIKVNDILDILTDGRFRLSIDENGFVVIDDGTKRNADGLSGGEKTLVSLSL
AMSIAEIAAGQMEAFFIDEGFSALDEDNKAKVAQTLKQMEKLNRVIGFVTHDPQFAEFFD
KKLVVEKGGVVKWI
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
ttgagcaaactgaggccactgacaattgaaatagagaattttctcggtattaaaaaatgc
aatttatctttcaaagatggcgtctttcttataattgggcaaaacggcgctggaaaatct
tctttacttgaagcaattgtttttgcactatatggaacaggagtcagatacgggaaaaaa
agtccgtcagagtatattcgttcgagatcctcaagctgtcagatcaagttctcgtttctg
agaaatggaaaaaagtacgaagtcataaggcgcatcaaagcttccggcggttccgaggca
tctctgtctgaaaacaacgcagttgttaccacgcacaggactctggtagataaagaattg
agaaaaatcatggacatctcttacgacagttttataacgacatttttcctgcctcagggc
agggcagctcaccttttaactgcaaggagatctgagataaatgatattgtctttgacgtg
atttccccaaagaaaacaatcaaagcaatgcaagaaaagataagtgaaatagtcagaaaa
ctggaatctgagcatgaaaaatatcaggctcgattagcagattttaggggcagattagaa
aaactttcgagccagaatccacacaagcaaatatcggaactgacaaatgctattcaaaat
ctgtcgggaaaaattgacataaagcaaaaagaattgaaacaaatcgagaaagaaaaagat
ctgtggaatgaaattaatcaaatcgagaaaacacttgaaaatttagagaaaaaaaagcac
cgggtgcttgaagaagcagaggaagaaaaaaagatttcccttgcaaaatccttgggagca
gaataccagatctttctaacatcaaaaaagcaaatggaatctctcaaagatgatgccaaa
gtacttgaaaaacaaatcaatagccttgagtatgagttcaaaaaggtcaacactcaactt
gagcaacttttcacaaaacagcaagatatagacaaaagaatttcccaatctacatctgaa
ctggaaaaactacagaaaatagatatagagagcaacgaattgctgaaaaaattgaatgaa
ttaaaagcagttaaattaagaatcagcaaagacatagatgatctgcagaattctttgaac
aaaacacaggacttgattgaagaaaagcagcgtttactgtttcaaaagcaaaaacaattt
ttcgaacaagagtctgaattcaatcagattaaacaaaaggctattatccatatggctcag
gaaatagctcaaactttgcaagatggagatatttgtcctgtgtgtggaaattcttataaa
aaaagcgaattttcaaccacagtagaggaaaagatcgaaaaatacgaatatcttaagaaa
gcaatagaaatgctatccaaggaaatagatcaaatccagtttgagttaaaaaatctcctt
gaagaaaaagaaaaccttacgagaaaactcttagaaactcaagatgatctttctcttcac
gaagaagaaatttcaactgtttcaaaaaagcttttgcaaattggctacagtgacgatctt
aaaagcaagatccataatctttccaaacagatacagaacgccatgaacaacaagatcaca
gttcagtcggaaatttcccagctgaaagaacgatcagatcaaataaacaagcgaattagt
gaattgaaggaaagattgaagaaaaattcagaacagcaggaaaaaacagcgaaagaactg
cgatcgaataaggaaaagtttttcgagaaactcggtgagatcaactttaccttagaacaa
tttgagtcatattttaaaaaacaactcccgactcacagcgctgtccaggtgcttcaaaaa
atagaatcggaaatagtttacaacaaagaaaaacttacccagttaagaaacctaacgaag
atatccgcacaacagtgcgaaagcctttttgccgaattaaataacactgtagaattgctg
aaaaaacagcgtgataattttattcggcagaaagcagtgatggaacatttgataaaagaa
ctggaagaaattcgacgggaaaaagaaaatctggaacggatcttcaaccagattcataaa
gaatatcaaatcgctcaatcagttaaaagcaccttttcggcgagagaatttcagtcttat
atagcaaaaattgtacttgaaaatatcctcatcaaggttaatgatattctcgatatcctg
acagatggcaggttcagattatctatagatgaaaatgggtttgtcgtgattgatgacggt
acaaaaagaaatgcagacggcctctccggcggggaaaaaaccttagtatcactatctctg
gcgatgtcaatcgccgaaatcgccgcaggtcaaatggaagccttttttatagatgaaggc
ttttcagcccttgacgaagataataaagcgaaagtagcacaaacactaaaacaaatggaa
aaattaaacagggtaattggatttgtcacgcacgacccacagtttgctgaattttttgat
aaaaaacttgttgtcgaaaaaggtggtgtggtgaaatggatttag
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