Pseudothermotoga lettingae: Tlet_1205
Help
Entry
Tlet_1205 CDS
T00618
Name
(GenBank) CRISPR-associated protein Csx11
Organism
tle
Pseudothermotoga lettingae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AbiEii
HD
EELM2
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
ABV33767
UniProt:
A8F6I3
LinkDB
All DBs
Position
1255658..1259314
Genome browser
AA seq
1218 aa
AA seq
DB search
MITQNEMKQKAREYGVNPSTIERDYAQNWLLMALSSLPLVLKGGTGIRKVYISNYRFSDD
LDFTLLEEFSAEEFKTTIDKVIEKAREESGMNFFEDFEFQKNNNGFEIDTYFQFMQRGEN
RTKIKLDITKAKNERILLPVLREKIIHLYSDDLDCEVKVYSLEEIVAEKIRSLFQRTRPR
DLYDVWYLWSKTNDIDRRKVLKILPEKFKEKGVVVDIQDLESRKNDFRNAWEISLGHQLK
ELPDFETVFSIVLQEVKTMCVEMIKNNREMILIGEICALLHDIGKLHPNFIKTQSVEGIK
GLPHHSGGIDQLIKAELIDFFKSIDMKINTESMSIYDSIRFHHDNSTNNILKCLKECDRK
DSADDKGIVRRKQHLDSTWISSPFGHPKEKIDLNCLQKIFDDLQDELIELFKNYRSLDAK
HLRSNLINILKTPFSHALGETRIPANDVTLWDHSYSTASLFKSVLAAITCGTNPNPQDLK
WRIFAICWNGMEFINKGKKVAEIQSRNDVIENLKKKLTGIFEEEIPVGNVVFEDMNGIYF
TFPDLNRACDLAEECAKIALETIQKETQNELWPFFILSEATRTLTIIANVQRSAFEKKKV
PKMTPVLFVEDKERYLENPDLPSFTVRQSICPVCGIRPRDEGKERCKICYKRRQGRLSKW
LSNREETIWIDEVADKNNKIALISLNFYLDKWLDGTMVGTIYSQTFEDWLNSKKAKKFFE
NKQNIQKLRNKGVNIEKKNNMNLSKELLKTITDEDIKEDAGFKSNLINTFFEDISSSQDH
SSDGNYVERFVNNLKERLKPEPFNPSNLQKLLFTQNPSPARLYRIWQETTEFFDLVVSEV
KNKIYSNKWKRIKFFVNYTDLKSKLKQGMGIEEKTPYLVQIDDLKPQKLLVFHDENGEFY
TIESLGKFKFNNNIGEEAVKEALKQEFKHLAPEDDPDENLLNKSVKPDENNIKIEEYYPL
IEINKSPFSLRLIVPAQDSMKIIALVTDLYNEMFKRVIGKLSLNIKLLVTKRKFPLYLFL
DAENRMLEDEEFKKQVAMDPWWNIQRHDEFYGFYPAKPVEHENKYTLDDLNPISKGKIFY
LYPGYFDFDLLSENTDRYNIAYSKGEKIKRADEIYRLLTERPYYFYEISEILELWDVLTN
LTSSQIHFVEEALTLKIREWREVKDRENVFMNFAEATLKDAFNNKWDKLRDETKWFLLKS
ACNGLLLDTINLFKRTLA
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgattacgcaaaacgaaatgaagcagaaagcgagggaatacggggtaaatccatcaact
attgaaagagattatgctcagaattggctattaatggctttgtcttcccttcctttagtt
ttgaagggaggaactggcataaggaaagtgtatataagtaattacagattctctgatgat
cttgatttcactctgcttgaggaatttagtgcagaagaatttaaaacaactatcgataaa
gttattgaaaaggcaagggaagaaagtggaatgaattttttcgaggattttgagtttcag
aaaaataataacggttttgagattgatacttactttcagtttatgcagagaggtgaaaat
agaaccaaaataaagttggatataacaaaagctaagaatgaaagaatattactacccgtg
ctcagggaaaagataattcacctttattctgatgacctggactgtgaagtaaaagtatat
tctctggaagaaatagtagcagaaaaaataaggagtctgtttcaaagaacacggccaaga
gatttatatgatgtttggtatctatggagtaagacgaatgatatcgacagaagaaaggtt
cttaaaattcttcctgaaaaattcaaagaaaaaggggttgtagttgacatccaggatctt
gaaagcaggaaaaatgatttcagaaatgcatgggaaatttctcttggtcatcaattaaag
gaactgccagattttgaaacggtgttttcaattgtacttcaagaggtgaagactatgtgt
gttgaaatgattaaaaacaacagagagatgatattgatcggggaaatctgtgcactactt
catgatattggaaaactccatcctaattttatcaaaacacagtctgtagaaggcataaaa
ggactgcctcatcattccggaggtatagatcagcttattaaagcagagctaattgatttt
ttcaaaagcatagatatgaagataaacactgaaagcatgtcgatatacgattccatcaga
tttcatcatgataactcaacgaataacattttaaagtgtttaaaagaatgtgacaggaaa
gactctgctgatgacaagggtatagtaaggagaaagcagcacttggatagcacatggatt
tcttcgccgtttggtcatccaaaagagaaaatagacctgaactgcctccaaaaaatattt
gatgatcttcaagacgaattgattgaactcttcaagaattatcggtcgttagatgcaaag
catctcagaagcaatctgatcaacattctcaaaaccccattttctcatgcccttggggaa
acaagaattccggcaaacgatgtcactttgtgggatcattcttattcaacagcatctttg
tttaaatctgttttagctgcaataacatgtggaacaaatccaaatcctcaggatttaaaa
tggagaatattcgctatatgctggaatggaatggaattcataaacaaaggaaaaaaggtg
gctgagatccagtcaagaaacgatgtgatagaaaatctcaagaagaagttaacggggatt
ttcgaggaagaaattcctgtgggtaatgtggtctttgaagacatgaatggaatttatttc
actttcccagacctgaacagggcttgtgatcttgcagaagaatgtgcaaaaattgcttta
gaaacgattcaaaaagaaacccagaacgaactgtggccatttttcatcttgagtgaggca
acccgaactctcacgatcattgctaatgtacagagatctgcattcgaaaagaaaaaggta
cccaaaatgacaccagtattatttgttgaagataaggaaagatatctggaaaatcctgat
cttccatcctttactgttagacaaagcatatgtcctgtttgtggtatcagaccaagagat
gaaggaaaagaaagatgcaaaatatgttataagcgaaggcaaggaaggctttcaaaatgg
ctttcaaacagagaagaaactatatggatagacgaagttgcagataaaaacaacaaaatt
gctttgatatctttgaatttttaccttgataaatggctcgatggaacaatggtaggaaca
atttattcgcagacatttgaagattggttgaactctaaaaaagcaaaaaagttttttgaa
aataaacaaaacattcaaaagttaagaaataaaggagtaaatatagaaaaaaagaataat
atgaatctgtcgaaggagttactcaaaactattacagatgaggatattaaagaggatgct
ggatttaaaagcaatttaataaacacattttttgaagatattagctcttcacaggatcat
tcatctgatggaaattatgtcgaaagatttgttaataacttaaaggaacgattaaaacct
gaaccatttaatccatctaacctacaaaaattgcttttcacccagaacccgtctcctgcc
cgattgtacaggatatggcaggaaacaactgaattctttgatttggtagttagtgaggta
aaaaataagatctacagcaataaatggaaaagaataaagtttttcgtaaattatactgac
ttaaaatctaaactaaagcaagggatgggaatagaagagaaaactccttacttagttcaa
atagatgatttaaagccacaaaaactactcgtttttcacgatgaaaatggagaattctat
acaatagaatctcttggaaaattcaagtttaacaataacataggggaagaagctgttaaa
gaggcgctaaaacaggaatttaagcatctcgctccagaagatgatccagacgaaaatcta
ttgaacaaatcagtaaagcccgacgaaaataatataaaaatagaagaatactatccatta
attgaaatcaacaaatccccattctcacttcgcctaatagttcccgcgcaagactcgatg
aaaatcatagctctggttacagatctatacaacgaaatgtttaaaagagttataggaaag
ctttctttaaacatcaagctccttgtgacaaaaagaaaattccctctttatttatttctc
gatgcagaaaacagaatgcttgaggatgaagaattcaaaaaacaagtggcaatggatcca
tggtggaatattcaaagacacgatgagttctatggtttttatcctgcaaagcccgtagaa
catgagaacaaatatactctcgatgatctgaatccaatctctaaaggaaagatcttctat
ctctatccaggatatttcgacttcgatctactttcggaaaatacagacagatacaatata
gcttattcaaaaggagagaagataaaaagagcagatgagatctacagactcctcacagaa
agaccatattatttttatgaaatttctgaaatactcgagttgtgggatgttctaacgaat
ctaaccagttcacagatacattttgttgaagaagctctcactttaaaaatcagggaatgg
agagaggtaaaagacagagaaaatgtgttcatgaactttgcagaggcaactctaaaagat
gcttttaacaacaagtgggacaaattgagagatgaaacaaaatggtttcttttgaaatca
gcctgtaatggtcttttgcttgatactataaaccttttcaaaagaacactcgcgtag
DBGET
integrated database retrieval system
