Pseudothermotoga lettingae: Tlet_1482
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Entry
Tlet_1482 CDS
T00618
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
tle
Pseudothermotoga lettingae
Pathway
tle03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Tlet_1482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tle03400
]
Tlet_1482
DNA repair and recombination proteins [BR:
tle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Tlet_1482
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Tlet_1482
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_29
AAA_21
AAA_16
nSTAND1
AAA_25
RsgA_GTPase
AAA_23
nSTAND3
AAA_22
ATPase
DnaJ_CXXCXGXG
APS_kinase
Viral_helicase1
AAA_33
RNA12
DUF1412
Motif
Other DBs
NCBI-ProteinID:
ABV34038
UniProt:
A8F7A4
LinkDB
All DBs
Position
1548097..1550859
Genome browser
AA seq
920 aa
AA seq
DB search
MNNIKVKGARVHNLKNISVEIPKGKITVITGLSGSGKSTLAMDTIYAEGQRRYLESLSTY
ARQFLGELKKPDVDSIEGLSPAIAIDQRSVSHNPRSTVGTTTEVYDYLRVLFAKIGQPHC
PSCGRPVEKKSVDQIVNDLFSKFQKGVRIYILSPIAIDKKGSFKKEFSALVAKGFVRAEV
DGEIIRLEEIDELDKNKRHTIKLLIDRLILNSEEKYRIADDIEIAFRESNGFVEVKNIDS
NETLTFSEHMMCPVCNIGLPEINPKLFSFNNPYGACPHCHGLGYNLQVDPQLVLNTNVSI
DEGAIVPYSNDGYYLSLIKQTVRLLGGSTNIAFSQLPHHIQEAVLYGYGQFEGVINNLER
RYRETESEDVKEWIERKFIVQRTCPVCGGKKLKPEALSVTINGLNIIDVTELTIEKAYDF
ILKLQESFEEREQKIAGELTEEIRRRLQFMIDVGLGYLTLSRTVNTLSGGEAQRIRLATQ
IGSGLTGVTYVLDEPTIGLHQRDNMKLINTLKKLRDLDNTVIVVEHDEEVIRSADYIVDL
GPLGGENGGRVVYSGPVSKLIQSPGESITGQYLSGTKKIDFPKSRRRGNGKTLTLIGACH
NNLKNLTVSIPLSTFVCVTGVSGSGKSSLILDTLYPALMNEIYKTRLPTGKYDRIEGLEN
VDKVIAIDQSPIGRTPRSNPATYTKVFDSIRELFAMTPEAKAKGYSKSRFSFNLKGGRCE
ACQGHGLVKIEMLFLADVYVECEVCKGKRYNEETLQVRYKGKNIHDVLEMSVDEALEFFK
NVPVIFRTLKLLSEVGLGYIKLGQPATTLSGGESQRVKLASELRKLPTGKTVYILDEPTV
GLHFEDIRRLINVLHRLVDRGNTVIVIEHNLDVIKNADYIIDLGPEGGEQGGYVVATGTP
EEIAKVESSYTGQFLKKLLR
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
ttgaataatataaaggtcaaaggggcccgcgttcataatcttaaaaacatttcagtagag
attccaaaaggaaaaataacagtcataactgggctgtccggttcggggaaatcaaccctt
gcgatggataccatatatgccgaaggtcagagaagatatctggaatctctttctacttat
gccaggcagtttcttggcgagcttaaaaaaccagatgttgattctatagaagggctttct
ccagcaattgcgatcgatcagagaagtgtctcacacaatccgcgatctacagtaggaaca
acaacagaagtttatgattacttgcgagtccttttcgcaaagatcggtcaaccacactgt
ccgtcctgtggaaggcctgtggagaaaaagagtgttgatcaaattgtgaacgaccttttt
tcaaaatttcaaaaaggcgtgaggatatatatactttctccaattgcgattgacaaaaaa
ggttccttcaaaaaagaattttcagcccttgttgcaaaagggtttgttcgggcggaagtg
gacggagaaattataagattagaggaaatagacgaacttgacaaaaacaaaaggcataca
attaaacttttaattgacagattaattctgaacagtgaagaaaaatacagaatagcggat
gatatagaaatagctttcagagaaagtaacggatttgtcgaagtcaagaatattgattca
aacgaaacactgacatttagcgaacatatgatgtgcccagtatgtaatataggcttgcca
gagataaacccaaaattattttcgttcaataacccgtatggagcttgcccacattgccat
ggtctgggttacaatctccaagtagatcctcagcttgttttgaatacgaatgtaagcatc
gatgagggtgcaattgtgccatatagcaatgacggatattatttatccctcataaagcaa
actgttcgcttgcttggtggttcaacaaatatcgctttttcgcagttaccccatcacatc
caggaagctgtactttacggatacgggcaatttgagggagtaatcaataatctggaaaga
agatatagagaaactgagtcagaggatgtaaaagaatggatcgaaagaaaattcatagtt
cagagaacctgccccgtatgcggaggaaagaagctgaaaccggaggctctatctgtaact
ataaatggattgaatataattgatgtaacggaattaacgatagaaaaagcttacgatttc
atcttgaaattgcaggaatcttttgaggaaagagagcaaaaaattgcaggcgaattaact
gaagaaattagaagaagacttcagttcatgattgatgttggcttagggtatttaacgctt
tctcgcactgttaacacactctctggtggtgaagcgcaaagaataaggcttgcaacacag
ataggttctggcctgacaggtgtcacgtatgttttggatgaaccaacaatagggctccac
caaagggacaatatgaaattgataaatactttgaaaaaattgagagaccttgataataca
gtaattgttgttgaacacgacgaagaagtgataagaagtgccgattacatagttgatctg
ggacctctcggtggtgaaaacggtggaagggttgtctattctgggcctgtaagcaaatta
attcaatcacctggcgagtcaatcacaggacagtatttgtccggaacaaaaaaaatagat
tttccaaaatcccggcgcaggggcaacggaaagacattaacactaattggcgcatgccac
aacaaccttaaaaacttgacagtcagtatcccgctttcaacttttgtctgtgtgacgggc
gtatccggttctggcaaatcttccctgattctggacacgctttatcctgctctgatgaac
gaaatatacaaaaccagactgccaacaggaaaatacgatagaatcgaaggattggaaaat
gtagacaaggtaatcgccatagaccagtctcctataggaaggacacctcgaagcaaccca
gcaacatacaccaaggtatttgacagtataagagaactttttgcaatgacaccagaagca
aaagcaaaggggtattccaaaagtagattcagtttcaacctgaaaggaggaagatgcgag
gcatgtcagggccatgggcttgtaaaaatagaaatgttgtttttggctgatgtttacgtc
gaatgtgaagtttgcaaaggaaaacgctataatgaagaaactcttcaagttagatacaaa
ggcaaaaacatacacgatgttctcgaaatgtctgttgacgaagcactcgagttttttaaa
aatgtaccagtgatattcagaaccttgaagcttttgtctgaagtcggattggggtatata
aaacttggacaacctgctacaaccttatcaggtggtgaatctcaacgagtaaagcttgct
tcagagctgaggaagctgccaacaggaaagacagtctatattttagacgaacccaccgta
ggactacattttgaggacatcaggagattgataaatgttcttcacagacttgttgataga
gggaacacagtaatagtaatagaacacaacctggacgtcattaaaaatgcagattatata
atagatcttggtcctgaaggaggagaacaggggggctatgtggttgcaaccggcactcct
gaagaaattgcaaaagtcgagtcctcttacacaggacaatttttgaaaaaattactcaga
taa
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