Pseudothermotoga lettingae: Tlet_1789
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Entry
Tlet_1789 CDS
T00618
Name
(GenBank) apurinic endonuclease Apn1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
tle
Pseudothermotoga lettingae
Pathway
tle03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Tlet_1789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tle03400
]
Tlet_1789
Enzymes [BR:
tle01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Tlet_1789
DNA repair and recombination proteins [BR:
tle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Tlet_1789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
UvdE
PRMT5_TIM
Motif
Other DBs
NCBI-ProteinID:
ABV34343
UniProt:
A8F859
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All DBs
Position
1858691..1859542
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AA seq
283 aa
AA seq
DB search
MIKIGAHMPISYGFEKVPELTVEIGGNAFQIFSHSPRTWRAGLPSKESCEKFKIFMNKCA
IPFQNAFCHTGYLINLASPKEDIWTKSVQLMIIEGKICEMLGIPYLNVHPGSHTGSGERE
GMQRIVRAIDEFMKNTSNITLLLENVSPKGGNIGYKMHQLGQIIKSVSYPDRIGVTYDTC
HGFDAGYDITTKEGVTKLLDEMESAFGLWRLKMIHLNDSKAPFGKPLDRHENIGKGYIGD
EGFRNFLSFSQIQSVPWILETPDSKDLYKTEIKHVKSLLGLIE
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaataggtgctcatatgccaatttcatatggtttcgaaaaagtacccgagtta
acagtagaaatagggggaaacgcattccagattttttcacacagtccaagaacctggaga
gccggattgccttcgaaagaatcatgtgaaaaattcaaaattttcatgaataaatgtgca
attccgtttcagaatgcgttttgtcacacaggatatttaatcaacctggcaagtccgaaa
gaagatatatggaccaagtctgtgcaattgatgataattgagggcaaaatctgtgaaatg
ctgggtatcccttatctaaatgttcatccgggaagtcataccggttctggagaaagggaa
ggtatgcagagaattgttagggcaatagatgagtttatgaaaaacacttcgaacattaca
ttgctgcttgaaaatgtttctccaaaaggtggaaatattggctataaaatgcaccaactt
ggccagattataaaatctgtgtcttatccagatcgaatcggtgttacttacgacacatgc
catggttttgatgcgggctatgacataaccacaaaagaaggggtcacaaaattgcttgac
gaaatggaatcagcatttggactctggaggctgaaaatgatccatttgaacgattccaaa
gcaccttttggaaaacctcttgataggcatgaaaatattggtaaaggttatataggtgat
gaaggattccgaaacttcctgagcttttcccagatacagagcgtaccatggattctggaa
acacctgatagcaaagacctatacaaaacagaaataaaacacgtgaaatctcttctgggg
ttgattgaatga
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