Thiomicrorhabdus lithotrophica: NR989_00180
Help
Entry
NR989_00180 CDS
T09486
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tlh
Thiomicrorhabdus lithotrophica
Pathway
tlh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tlh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NR989_00180 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tlh03019
]
NR989_00180 (recQ)
03400 DNA repair and recombination proteins [BR:
tlh03400
]
NR989_00180 (recQ)
Enzymes [BR:
tlh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NR989_00180 (recQ)
Messenger RNA biogenesis [BR:
tlh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NR989_00180 (recQ)
DNA repair and recombination proteins [BR:
tlh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NR989_00180 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Anp1
Motif
Other DBs
NCBI-ProteinID:
WEJ62694
LinkDB
All DBs
Position
complement(43396..45195)
Genome browser
AA seq
599 aa
AA seq
DB search
MTTSAQQILQTVYGYDSFRSQQEEIINDVISGQDCFVLMPTGGGKSLCYQIPALIRSGTA
IVVSPLIALMQDQVSALQTNGVSAAYYNSSLDAQSAEQVLSQLHSGQLDLLYVSPERLLN
QTFIQRLQSLPIALFAIDEAHCISQWGHDFRPEYRQMGALREWFSQVPFIALTATADRAT
RQDIIDKLQFHQPKIHVSSFDRPNIRYRVLEKSQPMKQLLTFLESHQNLSGIVYALSRKR
VEEVAEKLKDEGINAKAYHAGLPAEIRHSVHQQFIRDEVDIVVATVAFGMGIDKPNVRFV
VHYDLPKNIEGYYQETGRAGRDGLASEALLLFGMQDVATAKHFVENVTDEEQRRLENFKL
SSMVDFAEAQTCRRNVLLNYFSEPSHKPCGNCDICLDPPTLFDGKEAAQKALSCIYRLEQ
SFGAKQVIDVLRGMDNERIRNLNHNQLSTYGVGKEYSAQEWSSILRQLIHLGYIYQDIQN
YSVLKLTELSGDVLKGKTEIQLAFPKKSASKVTRPGKKSSSKETLLDKDRDCFEELRALR
KEIAESEDKPAYQIFGDATLVEMAQKRPTTDNELLAISGVGEKKLENYGFEFLAALRAM
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgacaacatctgcgcagcaaattttacaaacagtttatggttatgactcatttcgtagt
caacaagaagagattattaatgatgtaatttctggccaagattgttttgttttaatgcct
acaggtggtggtaaatcactttgttatcaaattcccgctttaattaggtctggaacagcc
attgtggtttcaccactgattgctttaatgcaagatcaagtatccgccttacaaactaat
ggtgtttctgctgcttattataattccagtttagatgcacaatcggctgaacaagtttta
agtcaacttcattccgggcaattagatttattgtatgtttcgccagaacgacttttaaat
caaacctttattcaacgtttacagagtttaccgattgcactgtttgccattgatgaagca
cattgtatttctcagtggggtcatgattttagaccggaatatcgtcaaatgggtgcttta
agagagtggttttctcaagttccatttattgcacttaccgctacagcagacagagcaacc
cggcaagatatcattgataagcttcagtttcatcaacctaaaatacatgtaagtagtttt
gatcgccctaatattcgttatagagtgttagaaaaaagccagccaatgaaacagttactg
acttttttagaatcgcatcaaaatttgagtggaattgtttatgcgttaagtcgtaagcga
gtagaagaagtcgctgaaaaacttaaagatgaagggattaatgccaaagcctatcatgca
ggattacctgctgaaattaggcactctgttcatcagcaatttattcgtgatgaagtagat
attgttgtagcgacagtcgcttttggaatgggtattgataaaccgaatgtacgttttgta
gtgcattatgatttacctaaaaatattgagggttattatcaagaaacaggtcgagcaggg
cgtgatggtttggcttctgaagctttattattgtttggtatgcaagatgtggcaacagcc
aaacattttgttgaaaatgtcacagatgaagagcaacgtcgtttagaaaattttaaactt
tctagcatggtcgattttgccgaagctcaaacctgtcgacgtaatgttcttttaaactat
ttttctgaaccgagtcataaaccttgtggtaattgcgatatctgtttggatccacctact
ctatttgatggtaaagaggctgctcaaaaagcgttatcttgtatttatagactagaacag
agttttggtgctaaacaggttattgatgtactgagaggtatggataacgagcgtattcgt
aatttaaatcacaatcaattaagtacctatggtgttggtaaagagtattcagcgcaagaa
tggtcaagtatattgcgtcaattaatccatttagggtatatctatcaagatattcaaaac
tattctgtactgaagcttacagagctttctggtgatgttttaaaaggcaagacagagata
caactcgcttttcctaaaaaatcggctagtaaagttaccaggcctggtaaaaaatcgtct
tctaaagaaacattattagataaagatagagattgttttgaagagttaagagcattacgt
aaagaaattgctgaaagtgaagataagcctgcgtatcaaatttttggggatgcaacttta
gttgagatggctcaaaaaagacccacaacagataatgagttattggcaattagtggagta
ggtgagaaaaagttagaaaattatggctttgaatttttagccgcattaagagcgatgtaa
DBGET
integrated database retrieval system
