Thiomicrorhabdus lithotrophica: NR989_00895
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Entry
NR989_00895 CDS
T09486
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
tlh
Thiomicrorhabdus lithotrophica
Pathway
tlh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tlh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NR989_00895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tlh03000
]
NR989_00895
Transcription factors [BR:
tlh03000
]
Prokaryotic type
Helix-turn-helix
Other families
NR989_00895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF_2
GAF
AAA_2
GAF_3
AAA_5
Mg_chelatase
MCM
AAA_3
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WEJ62831
LinkDB
All DBs
Position
complement(224385..226079)
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AA seq
564 aa
AA seq
DB search
MKKVEHLDIANHSEYIVIKEAAEQIENAYDPEKAIHTILSLISRQMGLNRGRILLQDGDS
GYLHTAYSYGLTEEEISRSRFAMSEGISGKVMYTGTPTIVSDIDKEDDYLFRTVDRSTLP
EGKVSFIATPITRNNTVIGVFAVNRLANPRRSLDKDLGLLKLISLFVSEILAVHAMLERQ
THRLKEENEQLRSMALGQGSQYGIIGESSALMAALNKVGRATNTSVTVMLQGESGTGKER
FSRMLHLASHRKDGPFIAINCSAIPDELLESELFGHEKGAFTGAVQAKQGKMELAHHGTL
FLDEIGDMALGLQAKLLRVLEERTITRIGATKPIPIDIRIIVASHKDLHEAVNNGAFRLD
LFYRLNVFPIELPALRDREGDIRLLARHFLNQANQEYSASAIFDPEAMAFLERYDWPGNI
RQLENIIKRAVLLADKNRLISSNLINRIITEESGIIRGGSPSIAPQQNTTTTTIESWQTS
QVPNPIPTHPTPPSPPELQPYTTQEFFDPIHAPDEKRAYWRVSENEKDRLQQALEMARGN
KTRAALLLNMTPRQFSYRLKKLGM
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaagtcgaacacttagatatagcaaatcattctgaatacattgttatcaaagag
gctgcagaacagattgaaaacgcttatgatcctgaaaaagcgattcacacaattctcagc
ctaatatcaagacaaatgggtttaaatcgtggtcgaattcttctacaagatggtgactcc
ggctacttacacacagcctattcctacggattaacagaagaagaaattagtcgaagtcgc
tttgctatgagtgaaggaatttctggcaaggtaatgtataccgggacgccaaccattgtt
tctgacattgataaagaagatgactatttatttagaacggttgaccgatccaccttacca
gaaggaaaagtctcttttattgcgacaccgattaccagaaacaacacagtcattggcgtg
tttgctgttaaccgcttagccaatccacgccgatcattagacaaagacctggggctatta
aagcttatttctctttttgtgagtgaaatactggcggtccacgccatgcttgagcgtcaa
actcatagattaaaagaagagaacgagcaacttagatctatggctcttggccaaggaagt
cagtatggaattattggcgaaagctctgctctaatggcggctttaaacaaagtaggccga
gcaacaaacacctcggttacggtcatgcttcaaggcgaatcagggacaggtaaagagcgt
ttctctcggatgttacaccttgcttcacatcgaaaagatgggccattcattgcaattaac
tgttcagcaattcctgatgagttattagaatctgagctatttggtcatgaaaaaggtgct
tttaccggtgctgttcaagccaaacaaggaaaaatggaacttgcccatcatggaacgctc
tttttagatgaaattggtgatatggctttaggcctacaagccaaattgcttcgtgttctt
gaagagcgaacgattactagaattggtgcaacaaaacccattccaatcgatattagaatc
attgttgcttcacataaagacttacatgaagccgttaataacggcgcttttaggctagat
ttattttatcgtttaaatgtattccctattgaactccctgcattgcgtgatcgcgaaggt
gacattagactcttggcaagacactttcttaaccaagccaaccaggaatattctgcaagc
gccatatttgatccagaagccatggcgtttttagaacgatatgactggcctggtaacatt
agacaacttgaaaacattattaaaagagctgtattactagctgataagaatcgtctaatt
tcgtcaaacttaattaaccgcattatcactgaagagagcgggattatccgtggcggctca
ccatcaatcgcacctcaacagaacaccaccaccacaaccattgaaagctggcaaacctct
caagtaccaaatcctatcccaacacatccaacacccccgtcaccgcctgaacttcagcct
tatacaacacaggaattttttgacccgattcatgctcctgatgaaaagagagcctattgg
cgtgtatccgaaaatgagaaagatcgccttcaacaggctttagaaatggcaagaggtaat
aaaacacgagccgccttattacttaatatgacgccacgtcagtttagctatagattgaaa
aaattaggcatgtga
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