KEGG   Thiomicrorhabdus lithotrophica: NR989_01255
Entry
NR989_01255       CDS       T09486                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
tlh  Thiomicrorhabdus lithotrophica
Pathway
tlh02020  Two-component system
Brite
KEGG Orthology (KO) [BR:tlh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NR989_01255
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:tlh02022]
    NR989_01255
Two-component system [BR:tlh02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   NR989_01255
SSDB
Motif
Pfam: Response_reg Sigma54_activat Sigma54_activ_2 AAA_lid_14 HTH_8 DUF229 TrmB AAA_16 IIGP TP_0454_N AAA AAA_22 DUF7317 HTH_7
Other DBs
NCBI-ProteinID: WEJ62901
UniProt: A0ABY8CAA3
LinkDB
Position
complement(303963..305303)
AA seq 446 aa
MKPVKLLIVDDEKDIRSLMEEIFIEEGYQVETAANGVQAQNAWRSFLPDLIFLDVWMPDI
DGISLLKQMQDEGVLENTKVIMMSGHGTIETAIEATRLGAYDFLEKPLSLAKLIVTAERA
IEHNQLNQENRQLKQKQPEQFLPIGKSKSVIQLRETLDRLSKFTMPILVTGESGTGKHHF
AEAIHKTSQRHPSSCTPFHALDFNQLCLPENLDKLKKSLREVHQGTLIIANIEELSEDAQ
TLLSNIVLKQCYKLDNTSDAVCIDIRVIALTKGDLEGAVANQTFREDLYQRLKVMPIHIP
ALRQHTEDIPELVDYFVDHFVSFEGLEYRHFSVSAQNILRQHTWPGNLKELKNLIQRLLI
LGSGDVSDEEVRELLLNSQASNALNHVVDTSLPLKEGKEQFEARYLSQLLRETSGNVSET
AKRSGVDRTNLYRKLKALGINPKNPQ
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgaaaccagttaaattattaattgtggatgatgaaaaagatattcgcagtttaatggaa
gaaatttttattgaagaaggctaccaggtagaaacagccgcaaatggtgttcaagctcaa
aatgcatggcgtagttttttacctgatttgatttttcttgatgtttggatgcccgacatt
gatggaatttctttactcaagcagatgcaggatgaaggtgttttagaaaacaccaaagtc
attatgatgtctggacacggaaccatcgaaacggctattgaagcaacccgattaggcgct
tatgactttttagaaaaaccactctctttggccaaattaattgtcactgcagaacgtgcg
attgaacacaatcagcttaaccaagaaaaccgtcaacttaaacagaaacaacctgagcag
tttttacctattggtaaaagtaaatctgtgattcagttaagggaaactttggatcgtctg
tctaaatttactatgccaattttggttacgggtgaaagcggcacaggtaaacaccatttt
gcagaggctattcataaaacaagtcaacgccacccttcctcttgcacgccttttcatgct
ttagattttaaccagctctgtctacctgaaaacctcgacaaactcaaaaaatcccttaga
gaggtacatcagggcacgcttattattgcgaatattgaagaactgtcagaagatgcacaa
acactcctttcaaacattgttttaaaacaatgctacaaattagacaacaccagtgatgcc
gtttgtattgatattagagtcatcgccttaaccaaaggggacttagaaggcgcggtcgct
aaccaaacttttagagaagacctgtatcaaagacttaaagtcatgcctattcatattcct
gctcttcgtcaacacaccgaagatattcccgagctagtagattattttgttgaccacttt
gtatcgtttgaaggtttagaataccgccactttagtgtttctgcccaaaatattttgcgc
caacatacctggcctggtaatttaaaagaattaaagaacttaattcaacgcctactcatt
ttaggcagcggcgatgtgagtgatgaagaagttagagagctactactaaattcgcaagct
agcaatgcattgaatcatgtcgttgatacaagcctacctttaaaagaaggtaaggagcag
tttgaagcccgctatcttagtcagcttttacgtgaaacaagtggaaacgtttcagaaaca
gccaaacgatctggcgtagatagaactaatttataccgtaaattaaaagcgctaggaatc
aatccaaaaaaccctcagtag

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