Thiomicrorhabdus lithotrophica: NR989_01345
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Entry
NR989_01345 CDS
T09486
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
tlh
Thiomicrorhabdus lithotrophica
Pathway
tlh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tlh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NR989_01345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tlh02000
]
NR989_01345
02044 Secretion system [BR:
tlh02044
]
NR989_01345
Transporters [BR:
tlh02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
NR989_01345
Secretion system [BR:
tlh02044
]
Type I secretion system
Adhesin protein transporter
NR989_01345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
Peptidase_C39
SspH
AAA_21
AAA_29
Mycobact_memb
Motif
Other DBs
NCBI-ProteinID:
WEJ62919
LinkDB
All DBs
Position
complement(326084..328276)
Genome browser
AA seq
730 aa
AA seq
DB search
MPNQIDDKIEIIPEDVNEHENSVHTELNSPLLDCLVIYTKLNRQPYSKDSLIAGLPIDPQ
NITPEIFKRAAQRANIEATFKERKLENISNLVLPCILTLSNNQACILEHLDIDNNSAKII
IPEAPEGSKQVSVEQLNEDYLGYAIYLTNKTFHEQKTENLMGFQEGHWFWGTIWSSKSIY
RDVLIASIVINLFVLANPLFVMNVYDRIVPNNAVESLWVLAIGVSVVYMFDIILKYLRSY
FLEIAGKKSDVIMSGKLFEQTLGLTMSNRGGSIGVLANQLKEFDSIRSFLTSGTIATLVD
LPFTIIFLLVIFYIAGSIVLIPIAIILFILFYSFALKGPVKRAIEATYEANSQKNAVLIE
TLTAMETIKSLGVEARSQWRWEQAIGEIAKSSLKSKMLQSSLGRMTGFMQQMSTVIIVLA
GVYIIQAGDLTMGGLIATVMLSQRAIGPMGQFANLITSYQQTKTALTSLEELMAKDVERP
LHKRFIQHPVFEGRIEFNNVSFTYPGESKPALSRVSFVIKPGEKVGIIGRIGSGKSTIEK
LILGFYTADEGSILIDGIDITQLDPAEVRRNINYVPQDVTLFSGDVRDNISYRAPYVEDS
TIIRAAKLAGVDDFIKQHPSGYSLKVNEGGTSLSGGQRQSIGVARALLLDAPIYLFDEPT
NAMDAKTEQLMINRLQKGTLNSTTLVVTHKMSLLQLTERLMVIENGKLIADGAKQTVLEA
LKTGKINKNT
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgccgaatcaaattgacgataaaatagagattattccagaagacgtgaatgagcatgaa
aattcagtacatactgaattaaatagccctttacttgattgcttagttatctatacaaaa
ttaaatcgccaaccctactcaaaagattctttgattgctggtttaccgattgatccacaa
aatatcacgccagaaattttcaagcgagctgctcaaagagccaatattgaagctaccttt
aaagaacgcaagttagaaaatatttctaatctggttttaccttgtattcttaccctttca
aacaaccaggcctgtattctcgaacacttggatattgacaacaatagtgcaaaaatcatt
atccctgaagcgcctgaaggttctaaacaagtctctgttgaacaacttaatgaagactat
ctcggttatgcaatctacctaaccaacaagacttttcatgagcaaaaaactgaaaatctc
atgggctttcaagaaggtcactggttttggggcacaatttggtcatcaaagtcgatttac
agagatgtcttaatcgcgtcaattgtcatcaatctttttgtgcttgccaaccctttattt
gttatgaacgtctacgacagaattgttcctaataacgcagttgaatctttatgggttttg
gcgattggtgttagcgtagtctacatgtttgacatcattctcaagtacttgcgctcttat
ttcttagagattgccggtaaaaagagtgacgtaatcatgtcaggtaaactctttgaacaa
acgcttggcttaaccatgtctaatcgtggtggttctatcggtgtgcttgccaaccagctc
aaagagttcgatagtattcgtagtttcttaacctctggtactatcgctaccttggtagat
ttgccttttaccattattttcttattggttattttctatattgctggcagcattgtcttg
attcccattgcgattattctatttattctcttttatagctttgcgcttaaaggccctgtt
aaacgtgccattgaagcaacttatgaagcaaacagccaaaaaaatgcggtattaatcgaa
acactgaccgcgatggaaaccattaaatcattaggtgttgaggctcgatctcaatggcgt
tgggagcaggctattggcgagattgccaaatcaagcttaaagtctaaaatgctacaaagt
tcattaggccgcatgacgggctttatgcaacagatgagtacagtgattatcgttttagcc
ggtgtttatattattcaagctggtgacctaactatggggggattaattgccaccgttatg
ctgagccaacgtgcaattggtccaatgggtcaatttgctaacttaatcacgagttaccaa
caaactaaaacagcactgacgtctttagaagaactcatggcaaaagacgttgaacgccca
ttacataaacgctttattcaacatcctgtttttgaaggccgaattgaatttaacaatgtc
agctttacctacccaggtgaaagcaaacccgctttaagccgagtgagttttgttattaaa
ccaggcgagaaagtcggtattatcggaagaataggttcaggcaaatcgaccattgaaaaa
ctgatattaggtttctacaccgcagatgaaggttcaattttaattgatggtattgatatt
actcaacttgaccccgcagaagttcgccgcaacattaactatgtacctcaagatgtgact
ttattcagtggtgatgtaagagataacatctcctatagggcaccttatgttgaagactct
accattattagagcggctaaattagcgggagtagacgactttattaaacagcacccatct
ggatatagtttgaaagtcaatgaaggcggtacttcattatctggtggtcagcgtcaaagc
ataggggtagctagagccttactacttgatgcgcctatctacctattcgatgaaccaact
aatgcgatggatgctaaaacagaacaattaatgattaaccgtctacagaaaggaactttg
aacagtacaactctagtcgtcactcacaagatgagtctattacaacttaccgaaaggctc
atggtgatagaaaacggtaaactgattgccgacggcgctaaacaaactgtattagaagcc
ttaaaaactggaaaaattaataagaacacctaa
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