KEGG   Thiomicrorhabdus lithotrophica: NR989_01370
Entry
NR989_01370       CDS       T09486                                 
Symbol
rep
Name
(GenBank) DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
tlh  Thiomicrorhabdus lithotrophica
Brite
KEGG Orthology (KO) [BR:tlh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tlh03400]
    NR989_01370 (rep)
Enzymes [BR:tlh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     NR989_01370 (rep)
DNA repair and recombination proteins [BR:tlh03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    NR989_01370 (rep)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 AAA_11 ResIII SMC_N DEAD ADDB_N Acyl-CoA_dh_M RuBisCO_large
Other DBs
NCBI-ProteinID: WEJ62924
UniProt: A0ABY8CAD3
LinkDB
Position
complement(333713..335746)
AA seq 677 aa
MHSLNDRQQKAVKHIDTPALVLAGAGSGKTRVITEKIAYLIRKCDVKSHNIYAVTFTNKS
AKEMKERVTKLLKNENTTGLNVSTFHNLGLNIIRREYKALGYKSNFSIMDAADSGQILKE
LMHKQTLDPEVLDGVQWDISNWKNAHISPEDAINKAEDAQDKARAILYQAYQKQLKAYNA
VDFDDLIGLPVKLFTKNPEILQKWQNKVRYLLVDEYQDTNAAQYALVKQLVGVQARFTVV
GDDDQSIYAWRGAQPENLAMLKEDFPALELIKLEQNYRSTNRILKSANQLIANNPHVFEK
TLWSDMGAGDPLRVIACANENQEVERVVSEIIVHKFKYKTKNRDYAILYRGNHQARLMER
ALREQNIQYVISGGKSFFDHAEIKDIMSYLRIIVNPDDDAAFLRIVNTPRREIGASTLEK
LATYATGRDISLFEATQEFGLTTILSDKALKRVQHFGDQLLSWMQEADSAQGEEVPSFVR
QLVEKIEYDNWIHENSSNPKTAERRINNVRDLILWIERIVKKALEQDGEEKRLETIVTHM
ALMDMMERNESENDHDMVSLMTLHASKGLEFPHVFLIGMEEELLPHKQNLESPGLEEERR
LAYVGITRAQRSLTMTYATKRRKYGEDMRCEPSRFLEELPSESLQWEGKPGVVVSKEEQL
ETGNAHIANLKSFLKKD
NT seq 2034 nt   +upstreamnt  +downstreamnt
atgcacagtttaaacgatagacagcaaaaagccgtaaaacacatagacacccccgccctg
gtattagctggtgctggctcgggtaaaacacgtgtaattaccgaaaagattgcctattta
attcgtaaatgcgacgttaaatctcataatatttacgcggtaacctttaccaataaatcc
gctaaagagatgaaagagcgcgttaccaaactgctcaaaaatgagaacacgactggttta
aacgtttctacctttcataacctgggcttaaatatcattcgccgcgaatataaagctctg
ggttataagtctaacttttcgattatggatgccgcagatagtgggcaaattctaaaagag
ctgatgcacaaacagacattagatcctgaagtgttagatggtgtgcagtgggatatttca
aactggaaaaatgcgcacatcagcccagaagacgccattaataaagcagaagatgcgcaa
gataaagcacgggctattctctaccaggcctaccaaaaacaattaaaagcttacaatgcg
gtcgactttgatgacctgattggccttcctgtaaaactctttaccaaaaaccctgagatt
ttgcaaaagtggcaaaataaagtgcgttatttattggtagatgaatatcaagacaccaat
gcggcgcaatacgccttagtgaaacaattagtaggcgtacaggcacgctttaccgtggtt
ggagatgatgaccaatctatttacgcttggcgtggtgcacagcctgaaaacttggccatg
cttaaagaagactttcccgcattagaactgattaaacttgagcaaaactatcgctcaacc
aaccgaattcttaaatcagctaaccaacttatcgccaataatccacacgtatttgaaaaa
acgctatggagtgatatgggtgcaggtgatcctttaagagtcattgcctgcgccaatgaa
aaccaagaagttgaacgtgtggtttcagaaattattgtgcataagtttaaatacaaaacc
aaaaaccgcgattacgctattttatatcgtggtaatcaccaagctcgtttaatggaacgc
gccctgcgtgaacaaaatattcaatatgttatttcaggtggtaaatccttttttgaccat
gccgaaatcaaagatatcatgagttacttgcgcattattgttaacccagatgatgatgcc
gctttcttacgaattgtgaacactccaagacgagaaatcggtgcatccactttagaaaaa
ttagcgacctatgcaacaggccgtgacatcagcttatttgaggcgacacaagagtttggt
ttaaccactattttgtctgataaagcgctaaaacgtgttcagcattttggcgaccaatta
ctcagctggatgcaagaagcagacagtgcacaaggcgaagaagttccctcttttgtacgt
caattggttgaaaaaatcgaatacgataactggattcatgaaaactcaagcaacccaaaa
accgctgagcgccgcattaacaatgtacgcgatctgattttatggattgaacgtattgtt
aaaaaagcactggaacaagatggcgaagaaaaacgcttagaaaccattgtgacccatatg
gcattaatggatatgatggaacgtaatgaatccgaaaacgatcatgacatggtcagccta
atgactttgcacgcctctaaaggtttagagtttccacatgtctttttaattggtatggaa
gaagaattactgccacacaaacaaaatctagagtcaccaggcctggaagaagaacgtcgt
ttagcctatgtaggtattacccgagcacaacgctctttaaccatgacttacgccaccaag
cgtagaaaatatggtgaagacatgcgctgtgagccaagtcgatttttagaagaactaccg
tcagagtctctgcaatgggaaggaaaaccaggtgtggtagtttctaaagaagaacagctg
gaaacaggtaacgcccatatcgccaacttgaaatcgtttcttaaaaaagactag

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