Thiomicrorhabdus lithotrophica: NR989_02190
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Entry
NR989_02190 CDS
T09486
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tlh
Thiomicrorhabdus lithotrophica
Pathway
tlh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tlh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NR989_02190 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tlh03400
]
NR989_02190 (ung)
Enzymes [BR:
tlh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NR989_02190 (ung)
DNA repair and recombination proteins [BR:
tlh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NR989_02190 (ung)
Prokaryotic type
NR989_02190 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
OB_SHLD2_2nd
Motif
Other DBs
NCBI-ProteinID:
WEJ63082
LinkDB
All DBs
Position
complement(493972..494661)
Genome browser
AA seq
229 aa
AA seq
DB search
MIDNNLDIKLDSSWLPYLENEFSKPYMQELRAFLTSEKASGKKILPKTSEWFNALNSTPL
DQVKVIIIGQDPYPTPGHAHGLCFSVKPDVKPLPKSLLNINKELMTDIGVDNQHTGNLQP
WANQGVLLLNAVLTVEAGLTNSHQNKGWEQFTDAVIEVVNAQNEHCVFVLWGAYAQKKGK
MIDRHKHLVIESPHPSPLSAYRGFFGSQPFSKTNAYLKKNNKSIINWQL
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgattgataacaacttagacattaaactagactctagctggttaccttatttagaaaat
gaattttctaaaccctacatgcaggagctacgggcttttttaacttcagaaaaagcctcg
ggaaaaaaaatcctccctaaaacgagtgaatggtttaatgctttgaatagcacgccatta
gaccaagttaaggtcatcattattggacaagacccctacccaacgccaggtcatgcacac
ggcctatgcttttctgttaagcctgatgtaaaacctctgcctaagtcactattgaatata
aacaaagaactcatgacggacataggtgttgataatcaacatactggcaacctgcaaccg
tgggcaaatcaaggtgttttattacttaatgccgtattaacggtagaggcaggcctaaca
aattctcaccaaaataaaggctgggagcaatttacagatgctgtgattgaagttgttaat
gctcaaaacgaacattgcgtatttgtcttatggggagcttacgcccagaaaaaaggcaaa
atgattgaccgtcataaacacctcgtcatagaaagcccacacccttccccactatccgcc
tacagaggtttttttggtagccagcctttttcaaaaaccaatgcttatctaaaaaaaaat
aataaatctattattaattggcaactttag
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