Thiomicrorhabdus lithotrophica: NR989_02580
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Entry
NR989_02580 CDS
T09486
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
tlh
Thiomicrorhabdus lithotrophica
Pathway
tlh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tlh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NR989_02580 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tlh03400
]
NR989_02580 (uvrB)
DNA repair and recombination proteins [BR:
tlh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NR989_02580 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NR989_02580 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Viral_helicase1
Kinesin
Motif
Other DBs
NCBI-ProteinID:
WEJ63155
UniProt:
A0ABY8CB03
LinkDB
All DBs
Position
579648..581678
Genome browser
AA seq
676 aa
AA seq
DB search
MSKAFELVSQYEPNGDQPTAIAELVEGIQDGEAYQTLLGVTGSGKTFTIANVIKTVQRPT
IIIAHNKTLAAQLYGEMKSFFPNNAVEYFVSYYDYYQPEAYVPASDTYISKDSSVNEQIE
QLRLSATKALLEREDVILIATVSAIYGLGDPEMYLKMILQLRLGDSITQRDILARLTSMQ
YNRNDVELWRGTFRVRGDVIDVFPAEAEEYAVRIELFDDEVESIAWFDPLTGEVLTRPTR
VTVYPKSHYVTPRERVLEMVEKVKVELKERLEELRSMHKLVEAQRLEERTKLDIEMMVEL
GYCTGIENYSRYLSGREAGQAPPTLMDYFPKNSLLVIDESHVTIPQIGGMYKGDRSRKEN
LVSYGFRLPSALDNRPMMFEEFERAMPQAIFVSATPGKYEAEHCSHMVEQVVRPTGLLDP
IIEVRPATTQVDDLLGEITWRAELGQRILVTTLTKRMAENLTEYFEDHGVRVRYMHSDID
TVERIEIIRDLRLGEFDVLIGINLLREGLDIPEVALVAILDADKEGFLRSERSLIQTIGR
AARNVEGKAILYADKITKSMKTAIDETERRREKQIEYNLERGITPQGLNKKVSDILEDSP
YASKPTRPGNSKKAAEPNGEYTANKTMSPAELATHIKKLEKQMYKAAKELDFEAAANLRD
EIKTLKSNMVGIGDLR
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaaagcgtttgaattggtttcgcagtatgaacccaatggtgatcaacctactgcg
attgcggaattagttgaaggaattcaggatggtgaggcgtatcagacccttttgggtgtg
accggttcaggtaaaacatttacgattgctaacgtcattaaaacggttcagcgcccaact
attatcattgcccataacaagacgcttgcggcccagttgtatggagagatgaaaagcttc
tttccgaataacgcagtggaatattttgtttcttactacgactactatcagccagaagct
tatgtacctgcttctgatacctatatctccaaagactcctctgttaatgagcaaatagaa
cagctgcgtttatcagcgaccaaagccttactagagcgtgaagatgttattttgattgct
accgtatccgcgatctacggtttaggtgatcctgaaatgtatctgaagatgattcttcag
ctacgtttgggggattcaattacgcaaagagatattcttgcacgattaacttcaatgcaa
tacaaccgtaatgacgttgaattgtggcgtggtacttttagagtgcgcggtgatgtcata
gatgtttttcctgcagaagccgaagagtatgcggttcgcattgagttgtttgatgatgag
gtggaaagcattgcttggtttgaccctttaacaggtgaagtgcttacacgtccaacacgt
gtgacggtttatcctaagtcgcactatgttacacctcgtgaacgtgttctggagatggtt
gaaaaagttaaggttgagctcaaagagcgtttagaagaattacgctcaatgcataaactg
gttgaagcgcaaagattggaagagagaactaagctagatattgaaatgatggtagaactg
ggctattgcaccggaattgaaaactactctcgttatctatcaggacgtgaagcagggcaa
gcgccgccaacgttgatggactatttccctaaaaattcattactagtcattgatgaaagt
cacgtcactatcccgcaaattggcggtatgtacaaaggagaccgttctcgaaaagaaaac
cttgtgagctacggttttagactaccttcggcattggataaccgtcctatgatgtttgaa
gagtttgaacgagcaatgccacaagcgatatttgtatcagccacccctggtaaatacgaa
gcagagcactgttcacatatggttgagcaggtggtgagaccaaccggtttattagatcct
attattgaagtgagacctgccaccactcaagttgatgatttgctgggtgaaataacatgg
cgtgctgagttagggcaaagaattctggttacaacgttaacgaaaagaatggccgaaaac
ttaacagaatattttgaagaccatggcgttagagtgcgttatatgcattcggatatagac
accgttgagcgtattgaaattattcgtgacttacgcttaggtgagtttgatgtgttaatc
ggaattaaccttttaagagaagggttagatattccagaggttgctttagtcgcgatttta
gatgccgataaggaaggatttttgcgctcggaacgttcattgattcaaacgattggacga
gcggcacgaaatgttgagggaaaagcgattttatatgctgacaaaatcactaaatcgatg
aagacggcgattgatgagactgagcgccgcagagaaaaacagattgaatataacttagag
cgtgggattacgccccaaggtttaaataagaaggtgagtgatattcttgaagattcgccc
tatgcctctaaacccaccaggcctggtaactctaaaaaagccgctgagccaaatggagaa
tatactgcgaataaaacgatgtcgcctgctgaattggccacgcatattaagaagcttgaa
aaacagatgtataaggctgcaaaagagttagattttgaggcggcagcaaatttacgtgat
gaaattaaaacattgaaaagtaatatggttggaattggtgatttacgttaa
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