Thiomicrorhabdus lithotrophica: NR989_02895
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Entry
NR989_02895 CDS
T09486
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
tlh
Thiomicrorhabdus lithotrophica
Pathway
tlh02024
Quorum sensing
tlh03060
Protein export
tlh03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
tlh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
NR989_02895 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NR989_02895 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NR989_02895 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tlh02044
]
NR989_02895 (ffh)
Enzymes [BR:
tlh01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
NR989_02895 (ffh)
Secretion system [BR:
tlh02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
NR989_02895 (ffh)
Eukaryotic Sec-SRP protein
NR989_02895 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
cobW
Zeta_toxin
ABC_tran
AAA_16
YqeC
AAA_33
AAA_30
AAA_14
Thymidylate_kin
KTI12
AAA_31
nSTAND3
AAA_19
ArsA_ATPase
ATP_bind_1
T2SSE
APS_kinase
AAA_24
NACHT
AAA_28
AAA_17
DnaB_C
Helicase_RecD
SLFN-g3_helicase
ParA
TctA
ATPase_2
FliD_C
MobB
KAP_NTPase
AAA_25
Motif
Other DBs
NCBI-ProteinID:
WEJ63215
UniProt:
A0ABY8CB71
LinkDB
All DBs
Position
645996..647381
Genome browser
AA seq
461 aa
AA seq
DB search
MFDNLSDRLNKTFKVIRGQGRLTEANIKDALRDVRRALLEADVALPVVKSFITQVQERAV
GQEVSTSLNPGQAFIKIVREQLTEVMGAEAEPLKFNVEPPAVVMVAGLQGAGKTTSVAKL
AKWLKEREKKKVMVVSADVYRPAAIKQLETLAEQVDVLFYPSSADQDPIQIAKNAHAEAK
KQFADVLILDTAGRLHIDDEMMQEVQKLHSSINPCETLFVVDAMTGQDAANTAKAFNDAL
PLTGVILTKTDGDARGGAALSIREITGKPIKFIGAGEKTDALEPFHPDRMAGRILGMGDV
LSLIEEAEAKIDHKKAEKFAKKVQKSGAFDLEDFLEQLQQINNMGGVGGLMGKLPGMGQL
AGQVNEDVAAKEFKRLEAIIHSMTRKERQFPAVIKGSRKRRIALGSGTSVQDVNKLLKQF
TQMQKMMKKMKGGGMKNMMRGLAGKLPPGMGGMGGLPPGMR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacaatttatctgatcgtttaaacaaaacctttaaggtcattcgtggtcaaggg
cgtttaaccgaggcaaatattaaagatgctttgcgggatgtgcgacgtgctttattagag
gccgatgttgctttaccagttgtcaaaagttttattactcaagttcaagagcgcgccgtt
ggtcaggaagtttctactagtctaaaccctgggcaagcattcattaaaattgtacgagag
caattaacagaagtcatgggggcagaagccgagccgcttaaattcaatgttgaaccgcca
gcagtagtaatggttgccggtctacaaggtgcaggtaaaaccacctctgttgctaagtta
gctaaatggcttaaagaacgagaaaagaaaaaagtcatggtggtgtctgctgacgtttat
cgtccagcggcgattaaacagctagagactttggctgaacaagttgatgtacttttttac
ccatcatcagcggatcaagacccaattcaaattgctaagaacgcacacgctgaagctaaa
aaacagtttgccgatgtcttaatcttggatactgctggtcgcctgcacattgatgatgaa
atgatgcaggaagtacaaaagcttcatagcagtattaatccatgtgaaactttgtttgtt
gtcgatgcgatgacagggcaagatgcagctaataccgctaaagcgttcaacgatgcttta
cctcttacgggtgttattcttaccaaaactgacggtgatgcacgtggtggtgcggcactt
tctattcgagagattactggtaaacctatcaagtttattggtgcgggtgagaaaaccgat
gcgctagaacctttccatccagatcgtatggctggccgtattttaggtatgggtgatgtt
ttaagcttaattgaagaagctgaagcaaaaatcgaccataaaaaagctgagaagtttgct
aagaaggttcaaaagtctggtgcatttgatttagaggattttttagagcagctacaacaa
attaacaacatgggtggtgttggtggtctgatgggcaagcttccaggcatgggacagtta
gcagggcaggtaaatgaagatgttgcggctaaagagtttaagcgtttagaggcgattatt
cattctatgacgcgtaaagaacgccagtttcctgcggttattaaagggtcgcgtaaacgc
cgtattgcgttgggttcaggtacgtcagttcaggatgtgaataaactgttaaaacaattt
actcaaatgcaaaagatgatgaagaaaatgaaaggcggtggtatgaaaaatatgatgcgc
ggtctagcaggtaaattaccacccggcatgggtggaatgggtgggttgccacctggaatg
cgctaa
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