Thiomicrorhabdus lithotrophica: NR989_02935
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Entry
NR989_02935 CDS
T09486
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
tlh
Thiomicrorhabdus lithotrophica
Pathway
tlh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tlh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NR989_02935
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tlh01007
]
NR989_02935
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tlh03016
]
NR989_02935
Enzymes [BR:
tlh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
NR989_02935
Amino acid related enzymes [BR:
tlh01007
]
Aminoacyl-tRNA synthetase
Class I (U)
NR989_02935
Transfer RNA biogenesis [BR:
tlh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
NR989_02935
Prokaryotic type
NR989_02935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
HTH_Cmi2_C
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
WEJ63222
LinkDB
All DBs
Position
complement(652446..655214)
Genome browser
AA seq
922 aa
AA seq
DB search
MEKHFDPNTIETKWYQTWENQGYFKAQKPDADPYCIMIPPPNVTGSLHMGHAFQDTIMDT
LIRYNRMKGNDTLWQPGTDHAGIATQMVVERQLAAQGLTRHDLGREKFIDKIWEWKEESG
GTITKQLRRMGASPDWSRERFTMDDGLSDAVKEVFVKLYEEDLIYRGKRLVNWDPILHTA
VSDLEVVSEEEQGNLWHMRYPLTDGSGHLVVATTRPETMLGDQAVAVHPDDERYQHLIGK
TITLPLVGREIPIIADDYVDLEFGTGCVKITPAHDFNDYEMGKRHDLPMLNIFTIDAAIN
DEAPEKYQGLDRYEARKQIISDLEELGLMEDIKPHTLMVPRGDRSHAVIEPFLTDQWYVA
VQELAKPAIDAVKNGDIEFVPKNWENTYFEWMNNIQDWCISRQIWWGHRIPAWYDNNGKV
YVGRDEAEVREKNNLATDIVLSQDNDVLDTWFSSALWTFSTLGWPEKTPELEKFHPTSVL
VTGFDIIFFWVARMIMMGLKFTGEVPFKQIYVHGLVRDGEGQKMSKSKGNVLDPIDLIDG
IELEDLVAKRTYGMMQPEKAAKIEKSTRKQFPDGIPAFGTDAIRFTFASLASTGRDIRFD
LNRAEGYRNFCNKLWNATRYVLMNTEGFDTGVDESLEVELSLADRWITSRLQEVESEVAK
HFENYRFDLAATTLYEFTWNEYCDWYLELAKPILNKDSSDNAKRGTRKTLVRVLEALLRL
LHPIIPFITEEAWQAVGPLAGQHGNTIMLEPYPQADESKIDSAAIAELEWVKQFIVGVRK
IRSEMDIAPSKALEVLLAGLNDNDQAWLNNNRVYLQTLAKLESITVLEDEASAPESAVAL
VGEMKVLIPMAGLIDKDAELARLAKEIAKLQGEIKRLSGKLNNAGFVAKAPEDVVANERK
KLSDYEIALNNLEAQHDKIQQL
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcatttcgaccccaatactatcgagactaagtggtaccagacctgggaaaac
caaggttatttcaaagctcaaaaacctgacgctgacccttattgcattatgattccacca
ccaaacgtgactggaagtcttcatatgggtcatgcttttcaagataccataatggatacc
ttaatccgctacaaccgtatgaaaggtaacgacaccctttggcaaccaggtactgatcac
gcaggtattgcaactcaaatggttgtcgaacgccagctagccgcacaaggtcttactcga
catgacttgggtcgtgagaaattcattgataagatttgggagtggaaagaagaatctggt
ggcacgatcactaaacaacttcgccgcatgggcgcttctcctgactggagtcgtgaacgg
tttacaatggatgatggcctttctgatgccgttaaagaagtctttgttaagctatatgaa
gaagatttaatctaccgtggtaaacgccttgttaactgggatccaattctacacactgca
gtatcagatttagaagttgtttcagaagaagagcaaggcaatctttggcacatgcgttac
ccactaactgacggttctggtcacttagtcgtagccacaactcgtcctgaaaccatgttg
ggagaccaggcagtagccgttcaccctgatgacgagcgttatcagcatctaataggtaaa
acaatcacactaccgttagtgggccgtgaaattccaattattgcagacgactatgttgac
cttgagtttggaactggttgtgtaaaaattacgccagctcatgatttcaatgactatgaa
atgggtaaacgtcacgacttacctatgctaaatattttcaccattgatgcagctattaac
gacgaagcgcctgagaaataccaagggcttgatcgttatgaagctcgcaagcaaatcata
tcggacttagaagaacttggcttaatggaagatatcaagccacatacattaatggtaccg
cgtggtgatcgatctcatgctgttattgaaccgttcttgactgaccaatggtatgttgca
gttcaagagctagcgaagcccgctattgatgccgttaaaaacggtgatattgaatttgtt
cctaagaactgggaaaacacttactttgaatggatgaataatattcaggactggtgtatc
tctcgtcaaatttggtggggacatcgtatcccagcttggtacgacaacaatggtaaagtc
tatgttggccgtgatgaagctgaagtccgtgaaaaaaataatctagcgacagatatcgta
cttagccaagacaacgatgtactagacacttggttcagctcggctctatggacattctct
actctaggctggccagaaaaaacaccggaactagaaaaattccacccaacatctgttttg
gttactggttttgacatcatcttcttctgggttgccagaatgattatgatggggcttaaa
ttcacaggcgaagttccatttaagcaaatttatgtacacggtttagtacgagatggcgaa
ggccaaaaaatgtctaaatctaaagggaatgttttagaccctatcgacttaattgacggt
atagagctagaagacctagtagcaaaacgtacttacggcatgatgcaaccagagaaagcc
gctaaaatcgagaagtcaacacgcaaacagtttccagacggaattcctgcttttggtact
gatgctattcgctttacctttgcatctttagcttctactggacgtgatattcgctttgat
ttaaaccgtgctgaaggttaccgcaacttctgtaacaagctatggaacgcaacacgttat
gtattaatgaacactgaaggttttgacactggtgttgatgagtctctagaagttgagcta
tcacttgctgaccgctggattacgtcccgtttacaagaagtagaatctgaagtggccaaa
cattttgaaaactatcgttttgatttagctgcaacaactttatacgagtttacttggaac
gaatattgcgactggtatttagaactggcaaaaccaattctaaacaaagacagttctgat
aacgctaaacgcggaactcgcaaaacgttagttcgtgttttagaagccttacttcgtttg
ctacatcctattattccgtttatcacagaagaagcttggcaagcggtaggtccattagct
ggtcagcatggtaacacaattatgcttgaaccttatccacaagctgatgagagcaaaatt
gatagtgcagccattgcagaattggaatgggtaaaacaatttattgttggtgttcgtaaa
attcgttcagaaatggacattgcaccaagcaaggcattagaagttcttcttgctggttta
aatgacaatgaccaggcctggttaaataacaatcgtgtatacctacagactttagcgaaa
ctagaaagcatcacagtacttgaagatgaagcgagcgcgccagaatctgccgtagcttta
gttggcgaaatgaaagtactaatcccaatggctggtttaattgataaagatgctgaacta
gcgcgtttagcaaaagaaattgctaaactacaaggtgagattaaacgcctaagtggaaaa
ttaaacaatgctggctttgtagccaaagcacctgaagatgtagttgcaaatgaacgtaaa
aaattaagcgactacgaaattgctcttaataatttagaggctcaacatgacaaaattcag
cagctttaa
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