Thiomicrorhabdus lithotrophica: NR989_03150
Help
Entry
NR989_03150 CDS
T09486
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
tlh
Thiomicrorhabdus lithotrophica
Pathway
tlh00550
Peptidoglycan biosynthesis
tlh01100
Metabolic pathways
tlh01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
tlh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NR989_03150 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NR989_03150 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tlh01011
]
NR989_03150 (mrdA)
Enzymes [BR:
tlh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NR989_03150 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
tlh01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
NR989_03150 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WEJ63263
LinkDB
All DBs
Position
complement(699304..701157)
Genome browser
AA seq
617 aa
AA seq
DB search
MPDPLKFNSDAEAFQQKRLFRFRLYFAYGFVLLLFVFLISRMAHLQWYNYERYHGLAEGN
RISIETLPPTRGKIYDRNHILLADNQPVYALSMIREKMDDIHAFELALMNLLEGSDPEKI
EAYFKKFRQLNRSKAYTLPFSVSEEQAARFSVMSYKFPGVTLTARLKRVYPHKSTAVHAL
GYVGRINVKELKKLNEQEYLGTNIIGKAGIERFYEDRLHGSPGVQQIETNARGRILRKLE
TTPATPGEDIHLTLDIELQKYAESLFKDKVGSIIALDPQNGEILAFASMPTFDPNLFVDG
IDQKNYSRLLNDPHRPFINRAINGQYPPGSTIKPFVALGAIEKDYISPTKKIYDPGYFDY
AGHRYRDWKRTGHGLIDLNAAIAQSCDTYFYELSLTMGVDAIHDAMSPFGFGEKTNIDII
GESKGILPSQQWKMETKGKPWYRGETIISSIGQGYNLTTPLQLAKATAILANRGKIIQPH
LLKDELKDSSSSQIAIKKISNWDSVIQGMVDVMHGKKGTARRHGKGLPFKVAGKTGTAQV
FGLNQGKYNADELAKRLHDHSLFIGFAPVDNPKIAVAVIVENGGSGSKTAAPMAINLMKH
YLEEKLTGISTQTESKQ
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgccagaccctttaaagtttaatagtgatgcagaagcctttcagcaaaagcgcctattt
cgttttaggctctattttgcatatggctttgtattattgctttttgtctttttaattagc
cgcatggcgcatctgcaatggtacaactatgaacgataccacggcctagctgaaggcaat
cgcatctctatcgagactcttcctcctacacgtggaaaaatctacgaccgcaatcatatt
ttgcttgccgataaccaacctgtgtacgctttaagtatgattcgtgaaaaaatggatgat
attcatgctttcgaattagccttaatgaatctattggaaggaagcgatcctgaaaaaatt
gaagcttactttaaaaaattccgccaattgaatcgttcaaaagcctacaccttgccattt
tccgttagcgaagaacaggctgcacgattctcggttatgagttataagttcccaggcgtg
actttaaccgcccgccttaaaagagtttacccacacaaaagcacggcggtacatgcttta
ggctatgttggcagaatcaatgtcaaagaactaaaaaaactcaatgagcaagagtatcta
ggcactaatattattggtaaagctggcattgaacgcttttatgaagaccgcttacatggt
tcaccaggtgttcaacaaatcgaaacaaatgctcgtggccgcatcctaagaaagcttgaa
accacacctgcaacgcctggtgaagatattcatttaacgcttgatatagagctacaaaaa
tatgccgaatcgttatttaaagataaagtgggatcaatcattgctcttgacccacaaaac
ggagaaattctggcctttgcaagcatgccgacttttgatcccaacttatttgtagatggc
atcgatcaaaaaaattacagtcgcttacttaatgatccacaccgtccatttataaaccgt
gctatcaatggccaatatccaccagggtcaaccattaaaccgtttgtcgctttaggcgcc
attgaaaaagattacatatccccgactaaaaaaatctatgatcctggttattttgattat
gcgggccatcgctatcgtgactggaaaagaactggacacggcttgatagatttaaatgcc
gccattgcacaatcgtgcgatacctatttttatgagttaagtcttacgatgggggtagat
gcgatacacgatgccatgtccccttttggttttggtgaaaaaaccaatatcgatatcatc
ggtgaatcaaaaggcatattaccttcgcagcagtggaagatggaaacgaaaggtaagcct
tggtatagaggtgaaacaattatttcttcgattggccaaggttataacctaacaacgcca
ttacagctcgctaaggcgacagccatcttggcaaaccgaggtaaaattattcaacctcat
ttattaaaagatgaattaaaagattcctcatctagtcaaattgcgattaaaaaaatctcc
aactgggacagtgtaatccagggcatggtagatgtaatgcatggtaaaaaaggtaccgca
cgcagacatggaaaaggcttaccctttaaagtcgccggcaaaactggaaccgctcaagta
ttcggcttaaaccaaggtaaatataatgccgacgaacttgcaaaacgtctccatgaccac
tccctttttattggttttgcacctgtagacaatcctaagattgctgttgcggttattgtt
gaaaatggtggaagtggaagtaaaactgccgcaccaatggctattaatttaatgaaacac
taccttgaagaaaaactaactggcatatccacacaaactgaaagcaagcaatga
DBGET
integrated database retrieval system
