Thiomicrorhabdus lithotrophica: NR989_03425
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Entry
NR989_03425 CDS
T09486
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
tlh
Thiomicrorhabdus lithotrophica
Pathway
tlh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tlh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NR989_03425 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tlh03019
]
NR989_03425 (pcnB)
Enzymes [BR:
tlh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
NR989_03425 (pcnB)
Messenger RNA biogenesis [BR:
tlh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NR989_03425 (pcnB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
WEJ63316
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All DBs
Position
756242..757681
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AA seq
479 aa
AA seq
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MQRIIRKISAFFSRTKLLPEPASRGNNSPVIVKRQKHGISRKQIDKSALDVLYGLKRGGY
EGYLVGGCVRDLLLGLEPKDFDVVTDAEPDQVKSVFKQRCRLIGRRFRLAHVRFGRMMIE
VATFRGQGDGDGRKDRFGRKGKLSGPAREVDDAGRLLRDNVYGTIEEDVWRRDFTVNALY
YDIRTFSITDYAGGLEDIKKGQLRLIGDPKTRYREDPVRMIRAIRFAAKLGFKIEKRTEK
PITSLAPLLNDVSNARMFEEVLKLFHSGVAIEVFEKLRHYGLFEHLFPLTEEILSKEKDG
FPRMLVIEALKSTDSRIQEGKSVNPAFLFAAMLWEPMLQRKQDFLDEGFAHQDAFYAACN
DVIEQQIKRTAIPKRFTAQMRDIWNLQHRLPKRHGDRAQKIVEHPRFRAAYDFLGVRAAA
GETEVQSIFDWWTAYQEKDAVEQVAFANSVAKPERKKRVRRNRNFYRKRSQSAESGSKQ
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgaattattcgtaaaatcagcgccttcttctcaaggacaaaacttcttcctgaa
cctgcttcaagaggaaacaactctcccgttattgttaaacgtcaaaaacacggtatctct
cgcaaacaaattgataaatctgcattggatgtattgtatggactaaagcgaggtggctat
gagggctacctagttggtggctgtgtacgtgatctattgttaggtttagagccaaaagat
tttgacgtggtaacggatgcggaacctgatcaagtaaagagcgtttttaaacagcgttgt
cgccttattggccgtagatttagacttgcgcatgttcgttttggacgcatgatgatcgaa
gttgctacttttagagggcagggtgatggcgatggtcgtaaagatcgttttggccgtaaa
ggaaagttgtctggccctgcaagagaagtagatgatgctggccgcttactgagagataat
gtctacggtacgatagaagaagatgtgtggcgtagagactttactgtaaatgccctttat
tacgatattagaactttctcgattacggattatgcgggtggcctggaagatattaaaaaa
ggccagttacgtttaattggtgatcctaaaacacgttatcgtgaagatcctgttcgtatg
attcgtgcaattcgttttgcggcaaaactaggttttaagattgaaaaacgtactgaaaaa
ccgataaccagtttagcaccgctgttaaatgatgtttctaatgcccgtatgtttgaagag
gttttgaaactatttcatagcggagttgctattgaagtatttgaaaaattgcgccactac
ggtttatttgagcatctatttccattaacagaagaaattttgtcaaaagaaaaagatggt
tttcctcgaatgttggtcattgaagcgctgaaaagtactgatagccgtattcaagaaggt
aagtctgttaacccagcctttttgtttgctgccatgttatgggagccaatgctacaacgt
aagcaagactttttagatgaaggttttgcccatcaggatgccttttatgcagcctgtaat
gacgttattgaacagcaaattaaacgtacggcaattcctaaacgttttacggctcaaatg
cgtgatatttggaatttacagcatcgtttgccaaagcgtcatggtgatagagctcagaaa
attgtagaacatccgcgctttagagcagcatatgatttcttaggtgttagagccgcagca
ggcgagactgaagtacagtcgatttttgattggtggacagcctatcaagaaaaagatgct
gtagagcaagtggctttcgcaaattccgtcgccaagccagaacgtaaaaaacgcgtgcgc
cgcaaccgaaatttttatcgtaaaagaagtcagtcggctgaatcaggatctaagcaataa
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