KEGG   Thiomicrorhabdus lithotrophica: NR989_04000
Entry
NR989_04000       CDS       T09486                                 
Name
(GenBank) type I restriction endonuclease subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
tlh  Thiomicrorhabdus lithotrophica
Brite
KEGG Orthology (KO) [BR:tlh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tlh02048]
    NR989_04000
Enzymes [BR:tlh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     NR989_04000
Prokaryotic defense system [BR:tlh02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   NR989_04000
SSDB
Motif
Pfam: EcoR124_C SWI2_SNF2 T1R_D3-like HSDR_N ResIII DEAD SNF2-rel_dom UvrA_inter
Other DBs
NCBI-ProteinID: WEJ63424
LinkDB
Position
877962..880832
AA seq 956 aa
MTNKVADSQGVYFSGQLQSEAQLENNLIQQLSSQGYERVSIETETELLSNLKSQLEKHNK
TTFSDNEFSKILNHLNKGNVYERAQTLRDKFNLKRDDDSTLYIEFIDQIEWCQNQYQVTN
QVTIKGEYENRYDVTILINGLPLVQIELKRRGLELKEAFNQTNRYHRHSYGAGTGLFQYI
QLFVISNGVNTKYYANNRKQSFKQTFFWSDKDNQAITQLESFAKTFLEKCHLSKMITKYI
VLNETDKILMVLRPYQYFAVEAIIDKVKNSVHNGYIWHTTGSGKTLTSFKAAQILTNLPK
VDKVVFCVDRKDLDYQTAKEFNSFSEGSVDSTDNTQKLVQQFGDDTKLIVTTIQKLNTAI
MKERYKTAMEPLKDKHIIFIFDECHRSQFGETHQRITEYFNHYQMFGFTGTPIFAENVAK
NKLGKRTTKDLFGECLHKYVITDAIRDDNVLKFAVEYIRTFKQRDTVQDIEVQDIDTKEV
MESPQRLEAIVDYIIANHDRKTHAKEFTGMMCVSSVDVLTAYYDIFKAKKEAGEHNLKIA
TIFSYAANEDDKDADDSIPEETTDMEGKAVNQHSRDKLESYIGDYNQMFGTKYTTKDSKS
FYNYYNELAKRVRDKQVDILLVVNMFLTGFDSKPLNTLYVDKNLKYHGLIQAFSRTNRIM
GEKKSQGNIVCFRNLKQATDDAIGLFSDKNAKDTIIMEPYENYVEQFNEALEALRSIAPD
VDSVNDLQSEEDKFNFIKAYRELMRVYNVLATFTDFEFDDLAINEQEYADYGSKYLDLYD
SVKNDRQKEKVSILNDVDFELELIHRDEINVTYILKLLGQLKDAPKEEHENRKKNIIDML
SGDVGMRSKKELIEKFIHENLPEIQNGGEVEQRFKQFWQEQDKAEIERICSEEGLDQEKV
KKLISSYLFTEKLPYRDDVVDTMHQKPTILKRKTVSQRILDKMLDYIKTFVDGAPE
NT seq 2871 nt   +upstreamnt  +downstreamnt
atgacaaataaagtagcagattcacaaggtgtgtatttttctggtcagcttcagtcggaa
gctcagttggaaaacaatctaatccagcagctttccagtcaaggctatgagcgagtttct
attgaaacggaaaccgaacttttatccaatctaaaaagccaactagaaaaacataacaaa
accactttctcggataatgaattcagcaaaatcctcaatcacctaaacaaaggtaatgtt
tacgaacgtgcccaaacccttcgagataagttcaacttaaagcgagatgatgattcgact
ttgtatattgaattcatcgaccaaatagagtggtgtcaaaaccagtaccaagtcaccaat
caagtcaccataaaaggtgagtacgagaatcgctatgacgtgacgattttgattaatggc
ttacctttggttcagattgagttaaaacgccgaggattagagcttaaagaagcctttaac
cagaccaatcgttatcaccgtcactcttatggagcgggcacaggtctgtttcagtatatt
cagttgtttgtgattagtaatggcgtaaacaccaagtattacgctaacaaccgtaaacag
tcctttaaacaaacctttttctggtcagataaagacaatcaagcgattacccagttagaa
agttttgccaaaaccttcctagaaaaatgtcatctatccaagatgattaccaaatatatc
gtcttaaatgaaacagataaaatcttgatggtattgcgtccttaccaatactttgcagta
gaagcgattattgataaggttaaaaactcggttcacaatggctatatatggcacaccacg
ggttcaggtaaaactttaacctccttcaaagcagcgcaaatccttaccaacttacctaag
gtcgataaggtggtgttctgtgttgaccgtaaagacctggattaccaaaccgccaaagag
ttcaactcgtttagtgaaggcagtgtagacagtaccgataacactcaaaagctagtgcag
cagtttggtgacgatactaagctgattgtgacgaccattcaaaagctgaataccgcgatt
atgaaagagcgttataaaacggcgatggaaccgcttaaagataaacacattatctttatc
tttgatgagtgtcaccgcagtcagtttggggaaacccatcaacgcattaccgaatacttt
aaccactatcaaatgttcggctttacgggcaccccaatttttgctgagaacgtcgccaaa
aacaaactcggtaaacgcaccactaaagacctatttggggaatgtttacataagtacgtc
attaccgatgcgataagagacgataacgtgcttaaattcgctgtggagtatatccgcacc
tttaaacagcgtgatacggtgcaagacattgaagtacaagacatcgataccaaagaggtg
atggagtcgccacaacgcttagaagcgatagtggattacatcattgctaaccacgaccgt
aaaacccatgctaaagagtttaccggcatgatgtgtgtgagttcggtagatgttctgacc
gcttactacgatatatttaaagccaaaaaagaagcgggtgaacacaacctgaaaatagcc
acgatctttagctatgccgccaatgaagacgataaagatgcggacgacagtattccagaa
gaaacaaccgacatggaaggtaaagcggtcaatcaacatagccgtgataagttggaatcg
tacattggtgactacaaccaaatgtttggcaccaaatacaccaccaaagattctaaatcg
ttttacaactattacaacgaattggcaaaacgtgtaagagataagcaagtcgatattctg
ctagtcgtgaatatgttcttaaccggctttgactccaaaccactcaataccttgtatgta
gataagaaccttaaatatcatggattgattcaagcattttcacgcaccaaccgaatcatg
ggtgagaaaaaatcccaaggtaacattgtctgcttccgtaacctcaaacaagccaccgat
gatgcgattggattgttctcggataagaatgccaaagacaccattatcatggagccttat
gaaaactacgttgagcagttcaatgaggcgttagaggcgttaagaagtattgcccctgat
gtagatagtgtgaacgacttgcaatcggaagaagacaagttcaacttcattaaagcctac
cgtgagttgatgcgagtctataacgttttggcgacttttaccgattttgagtttgacgat
ttagcgattaacgaacaagaatacgctgactacggcagtaagtatcttgatttgtatgac
agcgttaagaatgaccgccaaaaagaaaaagtctccatcttgaatgatgtggactttgaa
ttagaactgattcatcgtgatgaaattaatgtgacttatattcttaagttgttagggcaa
ttgaaagacgcaccaaaagaagagcatgagaatcgtaagaaaaacatcattgatatgctt
tctggcgatgtgggtatgcgttctaaaaaagagctgattgagaagtttattcacgagaac
ttacccgagattcaaaacggtggtgaagtagaacaacgatttaaacaattctggcaagag
caagacaaagccgagattgaacgaatctgttctgaggaaggtcttgaccaggaaaaggtc
aaaaagctgatttcaagctatctatttaccgaaaaactaccttaccgtgatgatgttgtg
gataccatgcatcaaaaacccaccatcttaaaacgtaaaacggtttctcaacgtatttta
gataagatgttggattacattaagacttttgttgatggagcgccggagtaa

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