Thiomicrorhabdus lithotrophica: NR989_04460
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Entry
NR989_04460 CDS
T09486
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
tlh
Thiomicrorhabdus lithotrophica
Pathway
tlh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tlh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NR989_04460 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tlh01007
]
NR989_04460 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tlh03016
]
NR989_04460 (lysS)
Enzymes [BR:
tlh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
NR989_04460 (lysS)
Amino acid related enzymes [BR:
tlh01007
]
Aminoacyl-tRNA synthetase
Class II (A)
NR989_04460 (lysS)
Transfer RNA biogenesis [BR:
tlh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
NR989_04460 (lysS)
Prokaryotic type
Other AARSs
NR989_04460 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
ApoB100_C
Motif
Other DBs
NCBI-ProteinID:
WEJ63509
LinkDB
All DBs
Position
974841..976352
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AA seq
503 aa
AA seq
DB search
MSESQNNVPEVDENKIIAERRAKLTALREDGHSYPNTFRRENEAEALHAKYNEMTKEELA
EAEPVRVKVAGRMMLRRIMGKASFATLQDQTGRIQIYVTRDELPESFYNTQFKKWDLGDI
VGAEGYLFKTNTGELSVHVEHIELVTKSLRPLPDKFHGLQDQEMRYRQRYVDLIVNQESR
DTFVLRSKIVQHVRNFLIRKEFMEVETPMMHVIPGGATAKPFNTHHNALDMPLYLRIAPE
LYLKRLVVGGFERVFEINRSFRNEGLSTRHNPEFTMVEFYAAYTDYHQLMDYTEELLKEL
AELAVGSTKVPYQGLEFDFGKPFARLSMKDAILQYNEDVTADQLDTLESATALAESLKIH
IKEGYGLGKVITEIFEETVEEKLMDPTFITEYPAEVSPLARRNDENAFITDRFELFIGGR
ELANGFNELNDAEDQAERFKAQVEAKDAGDDEAMHYDEDYITALEHGMPPTAGEGIGIDR
LVMLFTDSASIRDVLLFPHMRQN
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaatcgcaaaacaatgtgcctgaagtagatgagaacaaaattattgcagaacgc
cgtgccaagctaactgctttaagagaagacgggcactcatatccaaatacattccgtcgt
gaaaatgaagctgaagcgcttcatgctaaatacaatgaaatgactaaagaagagttagct
gaagcagagcctgtaagagttaaggttgctggtcgtatgatgttgcgccgtattatgggt
aaagccagttttgctactctgcaagatcaaacagggcgtattcaaatttatgtaacacgt
gatgagttacctgaaagcttttacaacactcagtttaagaagtgggatttaggtgatatt
gttggcgcagaagggtatctgtttaaaactaatacaggtgagctttctgttcatgttgag
catattgagttagtgacaaaatctttgcgtccattaccagataaatttcatggtctacaa
gatcaagaaatgcgctaccgtcagcgttatgtagatttgattgtcaaccaagagagtcgc
gatacctttgttttacgttctaaaatagtccagcatgttcgtaatttcctaattcgaaaa
gagtttatggaagttgaaacaccaatgatgcatgtcattcctggtggcgcaacggctaaa
ccatttaatacacatcataatgcattagatatgcctctttacttgcgtattgcaccagag
ctttacctaaaacgtttagtggtgggtggttttgaacgcgtatttgaaattaaccgttct
ttccgtaatgaaggtctatctacgcgtcataacccagaattcacaatggttgaattctat
gcagcttataccgattaccaccagttaatggattacactgaagagcttctaaaagaactt
gcagagttagcggtaggttcgactaaggtaccttatcaagggttagagtttgattttggt
aaaccatttgcgcgtttaagcatgaaagatgcaatccttcaatataacgaagatgtaacg
gctgatcagctagacactttggaaagtgcaacagccttagcggaatctttaaaaattcat
attaaagaaggttacggtttaggcaaagttattactgaaatctttgaagaaacagttgaa
gagaagttaatggatccaacattcattactgaatatccagccgaggtttcgccgcttgct
cgtcgtaatgatgaaaatgcatttattacagaccgctttgaactatttattggcggacgt
gagctcgctaatggctttaacgagttaaacgatgctgaagatcaggctgaacgctttaag
gctcaggtagaagcaaaagatgcgggtgatgatgaagcaatgcattatgatgaagattac
attacggctctagagcacggaatgccgcctacagcgggagagggtattggtattgaccgt
ttagttatgctgtttacagattcagcttctatccgtgatgtgttgttgttccctcatatg
cgtcaaaactaa
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