Thiomicrorhabdus lithotrophica: NR989_04565
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Entry
NR989_04565 CDS
T09486
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
tlh
Thiomicrorhabdus lithotrophica
Brite
KEGG Orthology (KO) [BR:
tlh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tlh03400
]
NR989_04565
Enzymes [BR:
tlh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
NR989_04565
DNA repair and recombination proteins [BR:
tlh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
NR989_04565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Complex1_LYR_2
Motif
Other DBs
NCBI-ProteinID:
WEJ63530
LinkDB
All DBs
Position
complement(996749..998290)
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AA seq
513 aa
AA seq
DB search
MNKIRNLCIVLGDQLNLDSALFDEFDANQDLIWMAEVIEESTHVKSHPQRIALFLSAMRH
FAERLQNQGWQIHYHALSKKHIQSPSSLAESLSKFLSENSVNNILVVLPGEYRVLKQLKT
TANQFKHRLNVLPDRHFISLPGEFSEWMSQRKKPVMEYWIRHLRKRTGILMENGQPCGAK
WNFDAKNRGNFGKKGPGLLVEAPIFSKDNITQDVLEIVADLFANHSGSLDSFNWPVTHKE
AQQALADFIENRLALFGQYQDAMWFDEPFLYHSLLSSSLNLKLISPLEVIQATEQAYRDG
QAPIEAVEGFIRQILGWREFVRGLYWHAMPQWKTWNHLDAQKALPSFYWTGKTDMRCLQQ
SISQVLEHGYGHHIQRLMVTGLFAQLWETNPIEVHEWYLAMYVDAVEWVELPNVLGMSQY
ADGGFMASKPYVATGKYIQKMSPYCSQCPYKPEESIGDKACPFTTLYWAFLLKHETEFSQ
HPRMALQIKHLANIDDVKREAIQHRVEFLRETL
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaatccgtaatctttgcattgtattaggcgaccaactcaatttagactccgct
ctatttgatgaatttgacgcaaaccaagatttgatttggatggctgaggttattgaggaa
agcacgcacgtaaaatctcaccctcaacgtatcgccttatttttaagtgccatgagacat
tttgcagaacgtctgcaaaatcaaggttggcaaattcattaccacgctctatccaagaaa
catattcaatcgccatccagtttggcagaaagtttaagtaaatttttatccgaaaattca
gttaacaatatcctagtggttttgcctggagagtaccgagttttaaaacagttaaaaaca
acggcaaatcaatttaaacataggctcaatgtattgcctgatcgtcactttataagtcta
ccaggtgagttcagtgagtggatgtcgcaacgtaaaaaaccggtaatggaatactggatt
cgccatctaagaaaacggactggaatcttaatggagaatggtcaaccttgcggtgctaaa
tggaactttgatgccaaaaaccgcggtaattttggtaaaaaaggcccgggcctgcttgtt
gaagcgccaatcttttcaaaagataacattactcaagacgtcttagagatagtggctgat
ttatttgctaatcattcaggaagtctcgacagttttaattggcctgttacccataaagag
gcacagcaagccttagcagatttcattgaaaaccgtttagcgctgtttggacaatatcaa
gatgcaatgtggtttgatgaaccctttctctaccattcattattatccagtagcttgaat
ctaaaattaatttcgccacttgaagtcattcaggctactgaacaggcttatcgtgacggt
caagccccgattgaagccgttgagggttttattcgtcaaattttagggtggcgagaattt
gtacgaggtttatattggcatgctatgccacagtggaaaacttggaaccatctagacgcg
caaaaggctctgccctctttttactggacaggtaaaaccgatatgcgttgtttgcagcaa
tctatctcacaggttttagagcatggttacggccaccacattcagcgtttaatggtaaca
ggcttgtttgctcaactgtgggaaaccaacccgattgaagtgcacgagtggtatttggcg
atgtatgtagatgccgttgaatgggttgaactaccgaatgtattaggtatgagtcaatat
gccgatggcggttttatggcaagtaaaccttatgttgcgacgggaaaatacattcaaaaa
atgagcccttattgcagtcaatgtccttacaaaccagaggaatcgattggtgataaagcc
tgcccatttaccactttatattgggcttttttactcaaacacgaaacagaatttagccaa
catcccagaatggctttgcaaataaaacatcttgctaacatagacgatgtaaaacgtgaa
gccattcaacatcgcgtggagtttcttagagaaacactttaa
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