Thiomicrorhabdus lithotrophica: NR989_05045
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Entry
NR989_05045 CDS
T09486
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
tlh
Thiomicrorhabdus lithotrophica
Pathway
tlh00020
Citrate cycle (TCA cycle)
tlh00190
Oxidative phosphorylation
tlh00650
Butanoate metabolism
tlh00720
Other carbon fixation pathways
tlh01100
Metabolic pathways
tlh01110
Biosynthesis of secondary metabolites
tlh01120
Microbial metabolism in diverse environments
tlh01200
Carbon metabolism
Module
tlh_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
tlh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NR989_05045 (sdhA)
00650 Butanoate metabolism
NR989_05045 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
NR989_05045 (sdhA)
00720 Other carbon fixation pathways
NR989_05045 (sdhA)
Enzymes [BR:
tlh01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
NR989_05045 (sdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
HI0933_like
Thi4
GIDA
FAD_binding_3
NAD_binding_7
NAD_binding_8
Lycopene_cycl
Pyr_redox_3
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
WEJ63623
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Position
complement(1097203..1099029)
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AA seq
608 aa
AA seq
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MQKRTNVNLDNIPTQQFDAIVIGAGGAGLRAALQLAESGHKIAVVSKVFPTRSHTVAAQG
GINAALGNVTPDNWQWHMYDTIKGSDYLGDQDAIEFMCQEAAEIVRELEHFGVPFSRLDN
GKIYQRAFGGQSQNYGEEQAHRTCAAADRTGHAILHSLYQQNIRLGSTIFEEYYSVDLLK
AKDGAISGCVVMNIHNGEYQILQSPNILLATGGAGQVFRTNTNAGINTGDGLGMALRAGY
PLQDMEFWQFHPTGIAGKGMLMSEAARGEGGVLRNALGEAFMEKYAPHVKDLASRDVVSR
AIAVEVQEGRGCGPNKDYVLLDLTHLEDKVVKERLPGIRDISITFAGIDPVEQSVPVFPT
CHYMMGGIPTNINGQVIYPNAQGQQETVTGLYAVGECACVSVHGANRLGGNSLLDIVVFG
RKAALTISENLKSHSAVHLEHDKDSLEQIRTRIEHWHDSSAKEQTNNSEQNTSDNVTQIK
KDLQAIMERGCGVFREHSLMQKALEELPAIEARLQEVQLSDQSDIFNLERLAAFELENLL
AIAYATVTSALARQESRGAHSRIDFQERDDQAWLKHSLYCHQTRQLSYKTVNLTPKTHKP
FEPKKRVY
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaacgtactaacgtcaatttggacaatatacccactcaacagttcgatgctatt
gtcattggcgctggaggagctggcttgcgtgcggctctacaacttgccgaatctggacat
aaaattgccgttgtgtctaaagtctttccgactcgttcccacacggtggccgctcaaggt
ggtattaacgccgctttaggaaacgtaacgccagataactggcaatggcacatgtacgat
accattaaaggcagtgactacttaggtgaccaagatgccatagagtttatgtgccaagaa
gcggccgaaattgtgcgtgaacttgaacattttggtgttcccttttcacgcctggataac
ggtaaaatctaccaacgcgcatttggcggacaaagccaaaactacggtgaagaacaagca
catcgcacttgtgccgccgcagatagaaccggtcacgccattctacactctctatatcaa
cagaacattcgcttaggttcgaccatatttgaagagtattactcggtagatttactcaaa
gcaaaagatggcgccatcagcggttgcgttgtcatgaatatccacaatggtgaatatcaa
atattacaaagccccaacattcttttggcaaccggtggcgcaggtcaagtcttcagaacc
aataccaatgcaggcatcaatacgggcgatggattaggcatggctctgcgtgctggctac
cctttacaagatatggagttttggcaatttcaccctacagggatagcaggtaaaggtatg
ttgatgtcagaagctgctcgcggtgaaggtggcgtattacgtaatgcgttaggtgaagcc
tttatggaaaagtatgcaccgcatgtaaaagacctggcctctagagacgtggtatcaaga
gccatcgcagtagaagttcaagaaggccgaggatgtggtccaaataaagactacgtttta
ctagacttaacgcatttagaagacaaagtggttaaagagcgtttacctggcattagagat
ataagcataacgtttgcaggcattgacccagttgaacagtccgtaccggtttttcctact
tgccactatatgatgggcggtattccaaccaatatcaatggccaagttatttatccaaac
gcccaaggacaacaagaaaccgttacgggtttatatgccgttggagaatgcgcttgtgtt
tcggtacatggcgcgaatcgtttaggcggaaactctctattagatattgtggtttttggt
cgtaaagcggccttaaccatttcagaaaacttaaaaagtcattccgctgttcatttagag
catgataaagactctctcgaacaaatacgcactcgcattgagcattggcatgattcgtct
gccaaagaacaaacaaacaattcagagcaaaacacttctgacaacgttacccaaataaaa
aaagatcttcaagccattatggaaagaggctgtggcgtgtttagagaacacagtctaatg
caaaaagcactggaagaactcccggctatagaagcacgtttgcaagaggtacagctatca
gatcaaagtgatatctttaatttagaacgtcttgctgcatttgaattagaaaaccttttg
gcgattgcctacgcaaccgtaaccagtgccttagcgcgccaagaaagtcgaggtgcgcat
tctcgtattgattttcaagaacgagatgaccaggcctggttaaagcacagtttgtactgc
catcaaactcgtcaacttagttataaaacagtgaacttaacaccgaaaacccacaaacca
tttgaacctaaaaagcgggtttattaa
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