Thiomicrorhabdus lithotrophica: NR989_05310
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Entry
NR989_05310 CDS
T09486
Symbol
nirB
Name
(GenBank) nitrite reductase large subunit NirB
KO
K00362
nitrite reductase (NADH) large subunit [EC:
1.7.1.15
]
Organism
tlh
Thiomicrorhabdus lithotrophica
Pathway
tlh00910
Nitrogen metabolism
tlh01100
Metabolic pathways
tlh01120
Microbial metabolism in diverse environments
tlh01310
Nitrogen cycle
Brite
KEGG Orthology (KO) [BR:
tlh00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
NR989_05310 (nirB)
Enzymes [BR:
tlh01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.15 nitrite reductase (NADH)
NR989_05310 (nirB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
NIR_SIR
Pyr_redox
Rubredoxin_C
Fer2_BFD
NIR_SIR_ferr
Pyr_redox_3
FAD_binding_2
GIDA
AlaDh_PNT_C
DAO
NAD_binding_8
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
WEJ63672
UniProt:
A0ABY8CDV9
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Position
1158233..1160776
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AA seq
847 aa
AA seq
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MSKQKIVVIGNGMVGHNFIEKLVASEGYDNFEVHTFCEEPRVAYDRVYLSSYFSGKTAED
LTLVKPKFYEKNGVNIYINDKAVDIDRSAKTVTSEAGITISYDKLVMATGSYPFVPPIEG
NNRDGCLVYRTIEDLDAMKEVAARGKVGVVVGGGLLGLEAAKALVDLGLDTHVVEFAPRL
MPVQLDDGGAALLKRKIENLGVTVHTSKATTMITDGQHCMNKMVFADGEELETDMVLFSA
GIRPRDDLGAKVGLELGPRGGILIDNQCRTNDPNVFAIGECALHDGMIYGLVAPGYAMAQ
AVVNQLNAEPGSFEGADMSTKLKLMGIDVASIGDPHGNDENALSYVYENGPEEIYKKIVV
TPDGKKLLGAVLVGDAEDFGNLLQIMLNDMDLPDHPDMLILPNRDGGGSELFGPDALPET
AQLCSCYDVSKGDIVNAIEGGCCTMADIKATTEAGTGCGGCVQLVTNVLNSELEKRGVEV
NTDICEHFGHTRQELYHICQVEEIKDFDTLLSKHGKGCGCEVCKQAVGSIFASLWNSYAL
EEDKIALQDTNDNYLGNMQKDGTYSVIPRVPGGEITPQKLIVLGEVATKYKLYTKVNGGQ
RIVLFGAQMNDLPAIWKTLIEAGFESGQAYAKSLRTVKSCVGSTWCRFGLDDSVTMAIAL
ENRYKGLRSPHKLKMGVSGCTRECAEAQAKDIGLISTENGWNLFVCGNGGMKPRHADLFA
TDLTTEQVFKYVDRLLMFYIKTADRMQRTATWMDNLEGGLAYLQDVVINDSLGMGEALEA
QMEALHNTYKCDWKTAIENPEFTKRFRSFVNVDTPAEQLFVQERGQIRPATEAEKLAGIA
VEIKQIA
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagcaaaagatagtggttattgggaatggtatggttggccataactttatagaa
aaattagtagccagtgaagggtatgacaattttgaagtacacactttttgtgaagaacct
cgtgttgcttatgatcgagtctatctatcttcgtatttttcgggcaagacagctgaagat
ttgaccttggtaaagcctaagttttacgaaaagaatggtgtcaatatttacattaatgat
aaggctgttgatattgatcgttcagccaagacagtaacatcggaagcgggtattactatc
tcttacgataagttggttatggcgacgggatcttatccttttgttccgccaatagagggg
aacaatcgtgatggctgtttagtttaccgcaccattgaagacttagacgcaatgaaagaa
gtggctgctaggggtaaagtaggtgtagtagtgggtggtggtttgttgggtttagaagcc
gccaaagcattagtcgacttaggtttagatacgcacgttgttgagtttgcaccacgttta
atgccagttcaacttgatgatggtggtgcggcattgcttaaacgcaaaatagaaaacctt
ggggtaaccgtgcatacctctaaagcgacgaccatgattaccgatggtcaacactgcatg
aataagatggtgtttgccgatggagaagagttagagaccgatatggtgctattttcagcc
gggattcgtccacgtgatgatttaggtgccaaagtgggtttagaactaggtcctcgtggt
ggaatattaattgataatcagtgcagaacgaatgaccctaatgtatttgcaattggtgag
tgtgctttacacgacggcatgatttatggccttgttgcaccagggtatgccatggcgcaa
gcggtggttaatcagttaaatgcagaacctggtagttttgagggtgcggatatgagcact
aagttaaaactgatgggaattgacgtggcttctattggtgatccacatggcaatgatgaa
aatgcgctttcctacgtttatgaaaatgggccagaagaaatttataaaaagattgttgtt
acgccggatggaaaaaaactattaggcgcggtattagttggcgatgctgaagactttgga
aacctgctacaaattatgctgaatgatatggatcttcctgatcatccagatatgttgatt
ttaccaaatcgtgatggtggaggttctgagttgtttggacctgatgctttgcccgaaaca
gcccaactttgttcgtgttatgacgtttctaaaggtgacattgttaacgcgattgaaggc
ggatgttgcacgatggcggatattaaagcaaccacagaagcgggtacagggtgtggaggt
tgtgttcagcttgttaccaatgttttgaacagtgaattagaaaaacgcggtgtcgaagtc
aatacagatatctgtgagcactttggccatacacgtcaagagctgtatcacatttgtcag
gtagaagagattaaagactttgatactttattatcaaagcacggtaaaggttgtggttgt
gaagtttgtaagcaagccgttgggagtatttttgcttccctttggaactcctatgcactt
gaagaagataagattgctttacaagataccaatgataactatcttggcaatatgcagaaa
gatggaacttactccgttattcctcgtgttcctggtggtgagattaccccgcaaaagcta
atcgttttaggtgaagttgcaaccaaatataaactgtataccaaggtaaacggtggtcaa
cgtattgttttgtttggtgcgcaaatgaatgatttaccggcgatttggaaaacattaatt
gaagctggttttgaatcaggtcaagcttatgcaaaatcgttgcgtacggttaaatcctgt
gtgggttccacctggtgtcgttttggtttagatgactctgtcaccatggcgattgcattg
gaaaatcgttataaaggtctccgctctcctcataaattgaaaatgggggtgtcgggttgt
acacgagagtgtgctgaagcgcaggctaaagatataggccttatttcaacagaaaatggt
tggaatctatttgtatgcggaaatggcggaatgaaaccgcgtcatgccgacctatttgca
acggatttaaccacagagcaagttttcaaatatgtggatcgcttactgatgttttacatc
aaaaccgctgatcgtatgcaacgcaccgcaacttggatggataaccttgaaggaggttta
gcctaccttcaagacgtcgttatcaatgattcgttgggtatgggtgaggcattagaagcc
caaatggaagcattacacaacacgtataaatgtgactggaaaacggctattgaaaatcct
gaatttaccaaacgtttccgctcatttgtaaacgtagatacaccagcagaacagttgttt
gttcaagagcgtggtcagattcgaccagcaacagaagctgaaaagttagctgggattgcg
gtagagattaagcaaatcgcttaa
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