Thiomicrorhabdus lithotrophica: NR989_06080
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Entry
NR989_06080 CDS
T09486
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
tlh
Thiomicrorhabdus lithotrophica
Pathway
tlh00300
Lysine biosynthesis
tlh01100
Metabolic pathways
tlh01120
Microbial metabolism in diverse environments
tlh01230
Biosynthesis of amino acids
Module
tlh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tlh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NR989_06080 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tlh01002
]
NR989_06080 (dapE)
Enzymes [BR:
tlh01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
NR989_06080 (dapE)
Peptidases and inhibitors [BR:
tlh01002
]
Metallo peptidases
Family M20
NR989_06080 (dapE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
WEJ61581
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All DBs
Position
1318020..1319153
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AA seq
377 aa
AA seq
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MTETIELAQKLIQIDSVTPNDKGCQNIIADYLKPLGFDTEHLKFGEVDNIWARKGTEAPC
FVFAGHTDVVPTGPESAWTHPPFSAHIDGDMMFGRGTADMKSSIACFMAATKRFVADYPD
HKGSIAYLITSDEEGPALDGTVKVVETLEARNEKFKYCLVGEPSSSNKLADSIKNGRRGS
LSGTLTIKGIQGHIAYPELADNPIHNMAPALEQLVQVQWDHGNEYFPPTSFQISNINGGT
GATNVIPGDVVIQFNFRFSTEHTPESLQESVHAILDHHKLDYTLDWNLSGLPFITPADGE
LIRAVRTASDNVMGYKPILSTAGGTSDGRFIAPTGAQVIELGPLNATIHKIDEQVSVSDL
NQLTEIYYHTLVELLAK
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaccattgaacttgcccaaaaattaattcaaattgattctgtaaccccaaac
gataaaggctgtcagaacatcattgctgactacctcaaaccattaggatttgatacagag
catttgaagtttggtgaagttgataatatctgggctcgtaaaggaacagaagcaccttgc
ttcgtttttgcaggtcatacagacgttgttccaacaggtccagaaagcgcatggactcac
cctccattttcagcacatattgacggtgacatgatgtttgggcgcggcacggccgatatg
aaaagttctatcgcctgctttatggccgcaaccaaacgttttgttgcagattatccagac
cataaaggctctatcgcttacctcattaccagcgatgaagaaggccctgctttagatggt
acggttaaagtagtagaaacattagaagcgcgaaatgaaaaatttaaatactgcttagtg
ggcgagccttctagctctaacaaacttgcagattctattaagaatgggcgtcgtggttct
ttaagtggtacgctgacaattaaaggaattcaaggccatatagcctaccctgagttggca
gacaaccccatccataatatggctccagcattagaacaattagtgcaagtacaatgggat
cacggaaacgaatacttcccaccaacctctttccaaatttctaatatcaatggtggcact
ggtgcaaccaatgtaattcctggcgatgttgttatccagttcaacttccgtttttcaaca
gagcatacacctgaatctttacaagaaagtgtccatgctatccttgaccaccataaatta
gactatacgttagactggaacttatcaggcttaccatttattacccctgccgatggtgaa
ttgattcgtgccgttcgaacggcttctgataatgttatgggctataaacctatcttatca
acggctggtggtacatctgatggtcgttttattgccccaacaggcgcacaagttattgaa
cttggccctttaaacgccactattcataaaattgatgaacaagtgagcgtcagtgattta
aatcaattaactgaaatttattatcacactttggttgaacttctcgctaaataa
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