KEGG   Thiomicrorhabdus lithotrophica: NR989_06545
Entry
NR989_06545       CDS       T09486                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
tlh  Thiomicrorhabdus lithotrophica
Pathway
tlh00010  Glycolysis / Gluconeogenesis
tlh00020  Citrate cycle (TCA cycle)
tlh00260  Glycine, serine and threonine metabolism
tlh00280  Valine, leucine and isoleucine degradation
tlh00310  Lysine degradation
tlh00380  Tryptophan metabolism
tlh00620  Pyruvate metabolism
tlh00630  Glyoxylate and dicarboxylate metabolism
tlh00640  Propanoate metabolism
tlh00670  One carbon pool by folate
tlh00785  Lipoic acid metabolism
tlh01100  Metabolic pathways
tlh01110  Biosynthesis of secondary metabolites
tlh01120  Microbial metabolism in diverse environments
tlh01200  Carbon metabolism
tlh01210  2-Oxocarboxylic acid metabolism
tlh01240  Biosynthesis of cofactors
Module
tlh_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
tlh_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:tlh00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    NR989_06545 (lpdA)
   00020 Citrate cycle (TCA cycle)
    NR989_06545 (lpdA)
   00620 Pyruvate metabolism
    NR989_06545 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    NR989_06545 (lpdA)
   00640 Propanoate metabolism
    NR989_06545 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    NR989_06545 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    NR989_06545 (lpdA)
   00310 Lysine degradation
    NR989_06545 (lpdA)
   00380 Tryptophan metabolism
    NR989_06545 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    NR989_06545 (lpdA)
   00670 One carbon pool by folate
    NR989_06545 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tlh04147]
    NR989_06545 (lpdA)
Enzymes [BR:tlh01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     NR989_06545 (lpdA)
Exosome [BR:tlh04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   NR989_06545 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Biotin_lipoyl Pyr_redox_3 FAD_oxidored GIDA FAD_binding_2 AlaDh_PNT_C NAD_binding_8 HI0933_like GCV_H Biotin_lipoyl_2 FAD_binding_3 3HCDH_N Thi4
Other DBs
NCBI-ProteinID: WEJ63769
LinkDB
Position
complement(1409231..1411003)
AA seq 590 aa
MSKIVDIVVPDIGDFAEVDVIEVLISAGEEVAQDDSLVTLESDKATMEIPAPFAGKVVSF
SAAVGDKVKEGSILGTIEIADNDTVAANVEESIKPAEPEVAKEATPAPQAVSSADLPDAD
MQCEVLVLGSGPGGYTAAFRAADLGKKVVMVERYSNIGGVCLNVGCIPSKALLHMSVVLN
ETKEMGAHGITFAEPQIDIDKIREFKDGVINKLTGGLSGLAKARKVEVVTGYGKFTSGNT
VSVEADDGSIKTIAFEKAIIAAGSRVIKLPFIPHDDPRVMDSTGALALEEIPERLLVIGG
GIIGLEMAQVYDSLGSKITVVELGDTIIPGADKDISKPLLKKIKKKYENIYLKSKVTNVE
AKEEGLLVTFEGKNCPETDMFDRVLVAVGRAANGKLIDAEKAGVAVNDWGFIEVNERQET
NVDNIYAIGDIVGQPMLAHKAVHEGKVAAEVINGMPSAFTPMSIPSVAYTDPEVAWAGKT
EEELKAEGIEYEKGAFPWAASGRSLSLGRDEGLTKAMFCAKTHRLLGCGMVGPNAGELIA
EAMLAIEMGADMQDIGLTIHPHPTLSETLCFAAEMAEGTITDLMPPKKRK
NT seq 1773 nt   +upstreamnt  +downstreamnt
atgagtaaaattgtagacatcgtcgttccagatattggtgactttgcagaagtagatgtt
attgaagtcttaatttcagctggtgaagaggtcgcgcaagacgattctttagtgacttta
gagtcagataaagcgactatggaaatccctgctccgtttgcgggtaaagtggtttcattt
tcagcggcagtaggcgataaagttaaagaaggttcaattctcggtaccatcgaaattgcc
gataacgacaccgttgcagcaaacgtagaagaaagcattaaaccagcagaaccagaagtg
gcaaaagaagcgactcctgcaccacaagccgtttcttcggctgatttacctgatgcagat
atgcaatgtgaagtgctggttttaggttctggtcctggtggctatactgcggcattccgt
gcggccgatttaggcaaaaaagtcgtcatggtcgagcgttacagcaacatcggtggtgtt
tgtctaaacgtaggttgtattccttctaaagccttattacacatgtctgtggtgttaaac
gaaaccaaagagatgggcgcacacggtattacctttgcagaacctcaaattgatattgat
aagattcgtgaattcaaagacggtgttatcaataagctaacaggcggtttatcaggcctg
gctaaagcacgtaaggtagaagtcgttactggttacggtaaatttacttcaggtaatacg
gtttctgtagaagcggacgatggttctattaagaccattgcgtttgaaaaagcgattatt
gcggcaggttcacgagttatcaaattaccatttattccacacgatgacccacgtgtgatg
gattcaaccggtgcattagcgctagaagaaatcccagaacgtctattggttattggtggc
ggaatcatcggtttagagatggcgcaggtttatgactctttaggctcaaaaatcaccgta
gttgaattgggcgatactattatcccaggtgccgataaagacatctctaaaccgcttctt
aagaaaattaagaaaaagtatgaaaacatctacctaaaatcaaaagtcaccaatgtagaa
gccaaagaagaaggcttattagtgacatttgaaggtaagaactgcccagaaaccgatatg
ttcgaccgtgtgttagtcgcagtcggtcgtgccgctaacggtaagctgattgatgcagag
aaagccggtgttgcggtaaacgattggggctttattgaagttaacgaacgccaagaaacc
aatgtcgataacatctacgccatcggtgacatcgtgggtcagccaatgttagctcacaaa
gcggtacacgaaggtaaagttgcggcagaagtcattaatggtatgccaagcgcgtttacc
cctatgtctattccatcggttgcctatactgaccctgaggttgcttgggcaggtaaaacc
gaagaagaacttaaagccgaaggcattgagtacgaaaaaggtgccttcccttgggcagcg
tcgggtcgtagcttaagtctaggtcgtgacgaaggtctaaccaaagccatgttctgtgcc
aaaacacaccgtttactaggttgtggaatggtcggaccaaatgccggtgaattgattgca
gaagcgatgttggcgattgagatgggtgcagatatgcaagatattggtttgaccattcat
ccgcatccgaccttgtcagagacgctttgttttgcggcagagatggcggaagggacgatt
accgacctaatgccacctaagaagcgtaaatag

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