Thiomicrorhabdus lithotrophica: NR989_06545
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Entry
NR989_06545 CDS
T09486
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
tlh
Thiomicrorhabdus lithotrophica
Pathway
tlh00010
Glycolysis / Gluconeogenesis
tlh00020
Citrate cycle (TCA cycle)
tlh00260
Glycine, serine and threonine metabolism
tlh00280
Valine, leucine and isoleucine degradation
tlh00310
Lysine degradation
tlh00380
Tryptophan metabolism
tlh00620
Pyruvate metabolism
tlh00630
Glyoxylate and dicarboxylate metabolism
tlh00640
Propanoate metabolism
tlh00670
One carbon pool by folate
tlh00785
Lipoic acid metabolism
tlh01100
Metabolic pathways
tlh01110
Biosynthesis of secondary metabolites
tlh01120
Microbial metabolism in diverse environments
tlh01200
Carbon metabolism
tlh01210
2-Oxocarboxylic acid metabolism
tlh01240
Biosynthesis of cofactors
Module
tlh_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
tlh_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
tlh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
NR989_06545 (lpdA)
00020 Citrate cycle (TCA cycle)
NR989_06545 (lpdA)
00620 Pyruvate metabolism
NR989_06545 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
NR989_06545 (lpdA)
00640 Propanoate metabolism
NR989_06545 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NR989_06545 (lpdA)
00280 Valine, leucine and isoleucine degradation
NR989_06545 (lpdA)
00310 Lysine degradation
NR989_06545 (lpdA)
00380 Tryptophan metabolism
NR989_06545 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NR989_06545 (lpdA)
00670 One carbon pool by folate
NR989_06545 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tlh04147
]
NR989_06545 (lpdA)
Enzymes [BR:
tlh01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
NR989_06545 (lpdA)
Exosome [BR:
tlh04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
NR989_06545 (lpdA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Biotin_lipoyl
Pyr_redox_3
FAD_oxidored
GIDA
FAD_binding_2
AlaDh_PNT_C
NAD_binding_8
HI0933_like
GCV_H
Biotin_lipoyl_2
FAD_binding_3
3HCDH_N
Thi4
Motif
Other DBs
NCBI-ProteinID:
WEJ63769
LinkDB
All DBs
Position
complement(1409231..1411003)
Genome browser
AA seq
590 aa
AA seq
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MSKIVDIVVPDIGDFAEVDVIEVLISAGEEVAQDDSLVTLESDKATMEIPAPFAGKVVSF
SAAVGDKVKEGSILGTIEIADNDTVAANVEESIKPAEPEVAKEATPAPQAVSSADLPDAD
MQCEVLVLGSGPGGYTAAFRAADLGKKVVMVERYSNIGGVCLNVGCIPSKALLHMSVVLN
ETKEMGAHGITFAEPQIDIDKIREFKDGVINKLTGGLSGLAKARKVEVVTGYGKFTSGNT
VSVEADDGSIKTIAFEKAIIAAGSRVIKLPFIPHDDPRVMDSTGALALEEIPERLLVIGG
GIIGLEMAQVYDSLGSKITVVELGDTIIPGADKDISKPLLKKIKKKYENIYLKSKVTNVE
AKEEGLLVTFEGKNCPETDMFDRVLVAVGRAANGKLIDAEKAGVAVNDWGFIEVNERQET
NVDNIYAIGDIVGQPMLAHKAVHEGKVAAEVINGMPSAFTPMSIPSVAYTDPEVAWAGKT
EEELKAEGIEYEKGAFPWAASGRSLSLGRDEGLTKAMFCAKTHRLLGCGMVGPNAGELIA
EAMLAIEMGADMQDIGLTIHPHPTLSETLCFAAEMAEGTITDLMPPKKRK
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaattgtagacatcgtcgttccagatattggtgactttgcagaagtagatgtt
attgaagtcttaatttcagctggtgaagaggtcgcgcaagacgattctttagtgacttta
gagtcagataaagcgactatggaaatccctgctccgtttgcgggtaaagtggtttcattt
tcagcggcagtaggcgataaagttaaagaaggttcaattctcggtaccatcgaaattgcc
gataacgacaccgttgcagcaaacgtagaagaaagcattaaaccagcagaaccagaagtg
gcaaaagaagcgactcctgcaccacaagccgtttcttcggctgatttacctgatgcagat
atgcaatgtgaagtgctggttttaggttctggtcctggtggctatactgcggcattccgt
gcggccgatttaggcaaaaaagtcgtcatggtcgagcgttacagcaacatcggtggtgtt
tgtctaaacgtaggttgtattccttctaaagccttattacacatgtctgtggtgttaaac
gaaaccaaagagatgggcgcacacggtattacctttgcagaacctcaaattgatattgat
aagattcgtgaattcaaagacggtgttatcaataagctaacaggcggtttatcaggcctg
gctaaagcacgtaaggtagaagtcgttactggttacggtaaatttacttcaggtaatacg
gtttctgtagaagcggacgatggttctattaagaccattgcgtttgaaaaagcgattatt
gcggcaggttcacgagttatcaaattaccatttattccacacgatgacccacgtgtgatg
gattcaaccggtgcattagcgctagaagaaatcccagaacgtctattggttattggtggc
ggaatcatcggtttagagatggcgcaggtttatgactctttaggctcaaaaatcaccgta
gttgaattgggcgatactattatcccaggtgccgataaagacatctctaaaccgcttctt
aagaaaattaagaaaaagtatgaaaacatctacctaaaatcaaaagtcaccaatgtagaa
gccaaagaagaaggcttattagtgacatttgaaggtaagaactgcccagaaaccgatatg
ttcgaccgtgtgttagtcgcagtcggtcgtgccgctaacggtaagctgattgatgcagag
aaagccggtgttgcggtaaacgattggggctttattgaagttaacgaacgccaagaaacc
aatgtcgataacatctacgccatcggtgacatcgtgggtcagccaatgttagctcacaaa
gcggtacacgaaggtaaagttgcggcagaagtcattaatggtatgccaagcgcgtttacc
cctatgtctattccatcggttgcctatactgaccctgaggttgcttgggcaggtaaaacc
gaagaagaacttaaagccgaaggcattgagtacgaaaaaggtgccttcccttgggcagcg
tcgggtcgtagcttaagtctaggtcgtgacgaaggtctaaccaaagccatgttctgtgcc
aaaacacaccgtttactaggttgtggaatggtcggaccaaatgccggtgaattgattgca
gaagcgatgttggcgattgagatgggtgcagatatgcaagatattggtttgaccattcat
ccgcatccgaccttgtcagagacgctttgttttgcggcagagatggcggaagggacgatt
accgacctaatgccacctaagaagcgtaaatag
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