Thiomicrorhabdus lithotrophica: NR989_06560
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Entry
NR989_06560 CDS
T09486
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
tlh
Thiomicrorhabdus lithotrophica
Pathway
tlh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tlh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NR989_06560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tlh03019
]
NR989_06560
Messenger RNA biogenesis [BR:
tlh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NR989_06560
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GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
WEJ61673
UniProt:
A0ABY8C6S0
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Position
complement(1415625..1416116)
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AA seq
163 aa
AA seq
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MIDSDGYRPNVGIIIVNKEGKLFWGKRIQQDAWQFPQGGIRENETPQQAVFRELKEEVGL
EPSDVRVLGRTEDWISYDLPKHLIRHYSQPVCIGQKQIWFMLGLESGVENINVAHHETPE
FEAWDWVDYWRPVQEVVSFKQAVYHQALTELEDSIKTFWLNKA
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atgatagattcagacggatatcgaccaaatgtcggtattattattgtaaataaagagggt
aagttgttttggggaaaacgcattcagcaagatgcttggcagtttcctcaaggtgggatt
cgtgaaaacgaaacaccgcagcaagccgtttttagagagttaaaagaagaggtcggttta
gaaccttctgatgttcgcgtgttaggcagaactgaagattggattagttatgacttacct
aaacatcttattcgccactacagtcagcctgtttgcattggacaaaagcaaatttggttt
atgcttggattggaaagcggggtagaaaatattaatgttgctcaccatgaaacgcccgaa
tttgaagcgtgggactgggttgattattggcgtcctgtgcaagaggtagtgagttttaag
caagcggtttatcatcaagcccttactgaactggaagattcaattaaaacattctggctc
aataaagcgtaa
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