Thiomicrorhabdus lithotrophica: NR989_06920
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Entry
NR989_06920 CDS
T09486
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
tlh
Thiomicrorhabdus lithotrophica
Pathway
tlh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tlh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NR989_06920 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tlh01007
]
NR989_06920 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tlh03016
]
NR989_06920 (aspS)
03029 Mitochondrial biogenesis [BR:
tlh03029
]
NR989_06920 (aspS)
Enzymes [BR:
tlh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
NR989_06920 (aspS)
Amino acid related enzymes [BR:
tlh01007
]
Aminoacyl-tRNA synthetase
Class II (A)
NR989_06920 (aspS)
Transfer RNA biogenesis [BR:
tlh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
NR989_06920 (aspS)
Prokaryotic type
Other AARSs
NR989_06920 (aspS)
Mitochondrial biogenesis [BR:
tlh03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
NR989_06920 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
WEJ61743
UniProt:
A0ABY8CC96
LinkDB
All DBs
Position
complement(1484386..1486167)
Genome browser
AA seq
593 aa
AA seq
DB search
MRTQYCGQVTETFVDQTVTVAGWVHRRRDHGGVIFIDLRDREGLVQVVVNPDTAEVFAKA
ERLRAECVLQITGNVIPRTEGTINPNMTTGKIEIVATELNVLSMAEPIPFQLDDKNVGEE
TRLKYRYIDLRRDEMQETLMLRYKVTRSMRRYLDDNHFMDIETPILTKSTPEGARDYLVP
SRTHQNKFFALPQSPQLFKQLLMMSGFDRYYQITRCFRDEDLRADRQPEFTQLDIETSFM
EEEAVMDLMEGLTKTIFKETIGHEFEGDFPRMPYSEAIQKYGIDRPDLRIDMQLVDVADL
LQDIDFKVFAAPAKDPKGRVAALKVPGAGSMSRKDIDAYTKFVGIYGAKGLAYIKVNDLS
AGVEGLQSPIVKFFPDQVMEIMQRVEAQDGDIVFFGADNAKVVNDALGALRVKIGEDLGM
LNGKFKPVWVVDFPMFEADEETARMTAIHHPFTQPKATTEEILNHDEPEQMLSKAYDLVI
NGLEVGGGSVRIHDTNMQAAVFKMLGISDEEAQEKFGFLLNALKYGCPPHAGMAFGLDRL
VMILGDIASIRDVIAFPKTQSAACLLTEAPGLVDNDQLADLALRFRKPVRGEA
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacgcagtattgtgggcaagttacagaaacatttgttgaccaaacagtaaccgtt
gcaggttgggtgcatcgtcgccgtgaccacggtggagttatctttattgatttacgtgac
cgtgaaggtttggtgcaagtagtcgtaaacccagataccgctgaagtgtttgcaaaagca
gaacgtttgcgtgctgagtgtgttttacagattactggaaacgttattccaagaacggaa
ggtaccattaacccgaatatgacaacgggtaaaattgagattgtcgctactgagcttaat
gttctcagtatggctgagccaattccttttcagcttgatgacaagaatgtcggtgaagag
acacgcttaaagtaccgttatattgatttacgtcgtgatgagatgcaagaaactctaatg
ctacgatacaaagtaacgcgttcaatgcgtcgttacctagatgataatcattttatggat
attgaaacacctatcctgactaagtctacacctgaaggggctcgtgactatttagtgcca
agccgcactcatcaaaataaattctttgctcttcctcagtcacctcagttgtttaaacag
ttgttgatgatgtctggttttgatcgttattatcaaattacccgttgtttccgtgatgaa
gatttacgtgcggatcgtcagcctgagtttactcaattagatatcgaaacttcttttatg
gaagaagaagcggttatggatttgatggaggggttaactaagaccatttttaaagaaaca
attggtcatgaatttgagggtgatttccctcgtatgccatattcagaagcgattcaaaaa
tatggtatcgatcgtcctgatttgcgtattgatatgcaattggttgatgtggcagattta
ttacaagatatcgactttaaagtatttgctgcaccagctaaagaccctaaaggtcgtgtc
gcggcgttgaaggttccgggtgctggttcaatgagtcgtaaagatattgatgcttatact
aagtttgttggtatttacggtgctaaaggtctagcttatattaaggtaaatgatttatcg
gctggtgttgaaggtcttcagtctccaatcgttaaattcttccctgatcaagttatggaa
attatgcagcgtgttgaagctcaggatggtgatattgttttctttggtgcagataacgct
aaagttgtaaacgatgctttaggtgctttacgtgttaagatcggtgaagacttaggtatg
ttgaatggcaagtttaagcctgtatgggttgttgacttcccaatgtttgaggcggatgaa
gaaactgctcgcatgaccgcaattcaccacccatttacccagccaaaagcgacaacagaa
gaaattttaaatcatgatgaaccagaacagatgctatctaaagcctatgatctagttatt
aacggtctagaagtgggtggtggttctgtacgtattcatgatacaaatatgcaagccgct
gtatttaaaatgttaggtatttctgatgaagaagcacaagaaaagtttggcttcttatta
aatgctttgaaatatggttgtcctccacacgcgggtatggcatttggtttagatcgttta
gttatgattttaggtgatatagcatccattcgtgatgttattgcattccctaaaacacag
tctgcagcgtgtttgttaactgaagcaccaggcctggtagataatgatcaacttgctgat
ttagcactaagattccgtaagccagttcgtggcgaagcgtaa
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