Thiomicrorhabdus lithotrophica: NR989_07615
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Entry
NR989_07615 CDS
T09486
Name
(GenBank) DNA cytosine methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
tlh
Thiomicrorhabdus lithotrophica
Pathway
tlh00270
Cysteine and methionine metabolism
tlh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tlh00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
NR989_07615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tlh03000
]
NR989_07615
03032 DNA replication proteins [BR:
tlh03032
]
NR989_07615
03036 Chromosome and associated proteins [BR:
tlh03036
]
NR989_07615
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
tlh02048
]
NR989_07615
Enzymes [BR:
tlh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
NR989_07615
Transcription factors [BR:
tlh03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
NR989_07615
DNA replication proteins [BR:
tlh03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
NR989_07615
Chromosome and associated proteins [BR:
tlh03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
NR989_07615
Prokaryotic defense system [BR:
tlh02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
NR989_07615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Methyltransf_31
Methyltransf_15
Methyltransf_23
DYN_lid
Motif
Other DBs
NCBI-ProteinID:
WEJ61880
LinkDB
All DBs
Position
complement(1636125..1637822)
Genome browser
AA seq
565 aa
AA seq
DB search
MVKLRVIDFFCGAGGFSEGFRQEGFEVVMGIDFWQPAIDSHNLNHGLEDSVKDVMDFWGE
DSGDVLEIDGIPDTEILIGSPSCVSFSMSNKAGKACKISGIQLILSFLRVICVKKHQKKS
ILQAWYLENVPQSEKFIQPNYTFSDLNLSRWARALGKKADDIAIQTKGYVLNAADYGAPQ
SRRRFIAGEFIETGEFPKPISNWLNHKTLGYIKSRLPSPYLKRNDNSEFVDPNYPKLKVK
MSELTDHFYDTGLYKIEWEKAQHLKTNHPYMGKMSFPENEDRSCRTIMATRSASTRESLI
FKSELNREENGEYRLPTIREAATLMGYPFVYQFTGTESTKWKQIGNSVSPHLSAALARAI
KACLKGKTPRKRGFSKLKGNYLKIINLNSFDVCTFETPKTRLSNAKFRRHPVKLGNMTVD
LQNFNDTYGVKDTSKWFVVAYFGTGVGHGVYEFKAKDFEVLESALKNNNVDLTMLNKYMH
GLVEGLQGISLQELYETDLDLIDSNNPINIVKSIRIKSNEFYNFDELGYIKCDILPKGRV
PVIQVVMAYALLWLINDYKDDSKKR
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagttaagagtaatcgattttttctgtggtgcaggagggttttccgaaggcttt
cgtcaggaaggttttgaggttgtaatgggaattgatttctggcagccagctattgattca
cataacttgaatcatggtttagaagattctgtaaaagatgtaatggatttctggggtgag
gactctggggatgtactagaaattgatgggattcctgatactgaaatattgattggaagc
ccttcgtgtgtttcattttcaatgtccaataaagccggaaaagcctgcaaaatatcaggg
attcaattgattctttcatttcttagagtcatttgtgtcaaaaaacatcaaaaaaaatcg
atattgcaggcatggtatttggaaaatgtaccgcaatcagaaaagtttatccaacctaac
tatactttttcagatttgaatcttagtcgctgggctagagctcttggcaaaaaggccgat
gatattgctattcaaactaaaggttatgttcttaatgcagctgattatggtgctcctcaa
tctaggaggagatttattgctggtgaatttattgaaactggtgaatttccaaaaccaata
tcaaattggttgaatcataaaactcttggatatattaaatctagacttccttcaccttat
ctgaaaagaaatgataatagtgaatttgttgatcctaactatccaaaattaaaagtgaaa
atgtctgaactgacagaccacttttacgacacagggttatacaagattgaatgggaaaaa
gcgcaacatctaaaaacaaatcacccttatatgggaaaaatgtcattccctgaaaatgaa
gatagaagctgtcgaacaattatggctacaaggtctgcatcaacccgagagtctttgatt
ttcaaatcagaattgaatcgtgaggaaaatggagaatatcgtttacctacaataagagaa
gcagcgacattgatggggtatccattcgtttaccaattcactggaaccgaatcaacaaag
tggaaacaaattggcaattcagtttctccccatcttagtgcagcacttgctagagcgata
aaagcttgtttaaaaggtaaaacacctcgaaaaagaggcttcagtaagctaaaaggtaat
taccttaaaatcattaacctgaattcttttgacgtatgcacttttgagaccccaaagaca
agattaagtaatgctaagtttagaaggcatcccgttaagcttggtaatatgacagtagat
ttacagaactttaacgatacttacggagtaaaagatacatctaaatggtttgttgttgcc
tatttcgggactggagtaggtcatggagtatatgagtttaaagctaaagacttcgaggta
ctggagagtgctttaaaaaacaataatgtagatttaacaatgctgaataaatatatgcat
ggacttgtagaggggttgcaaggtataagccttcaagaactctatgaaaccgatttagac
ttgattgactcaaacaatcctataaatattgttaaatctatacgtataaaatcgaatgag
ttttacaattttgatgaacttgggtatattaaatgcgatattttacctaagggtagggtg
ccagttattcaggttgttatggcttatgccttactttggctgataaacgattacaaagat
gattccaaaaaaagatga
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