Thiomicrorhabdus lithotrophica: NR989_08140
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Entry
NR989_08140 CDS
T09486
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
tlh
Thiomicrorhabdus lithotrophica
Pathway
tlh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tlh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
NR989_08140 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tlh03019
]
NR989_08140 (orn)
03009 Ribosome biogenesis [BR:
tlh03009
]
NR989_08140 (orn)
Messenger RNA biogenesis [BR:
tlh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NR989_08140 (orn)
Ribosome biogenesis [BR:
tlh03009
]
Eukaryotic type
Pre-60S particles
RNases
NR989_08140 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Sf6_terminase
Motif
Other DBs
NCBI-ProteinID:
WEJ61981
UniProt:
A0ABY8CBP2
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All DBs
Position
complement(1737494..1738072)
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AA seq
192 aa
AA seq
DB search
MKSDKNLIWIDLEMTGLEPKNHKIIEIATVVTDSELNVLAEGPVIAIQTEQSELDLMDEW
CTTHHGNSGLTQRVQESQVSMQEAERMTIEFLKDYVPAGKSPMCGNSICQDRRFMVEQMP
LLEQFFHYRNLDVSTLKELARRWAPKVYQSHQKSGAHLALADVLESIDELNHYRQYLLLP
EFQKEIMPRLSD
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcagataaaaatttaatttggattgatttagagatgacgggtttagagcctaaa
aatcataaaatcattgaaattgcgacagtggttaccgacagtgagctgaatgtcttagcc
gaagggcctgtcattgcaattcaaactgaacagtcagagttagatttaatggacgagtgg
tgcaccactcatcatggaaattcaggcttaactcaacgtgtgcaagagagtcaagtttca
atgcaagaggctgagcgcatgacgattgagtttttaaaagactatgttccggcagggaag
tccccaatgtgtggaaatagtatctgtcaagacaggcgttttatggttgagcaaatgccg
ttgttagagcaattttttcattatcgtaatttagatgtcagtaccttaaaagagctcgca
cgacgctgggctccaaaagtttatcagtcgcatcaaaaaagtggggctcacttagcttta
gcggatgttttagaatctattgacgagctaaatcattaccgacaatatttattactgcct
gagtttcaaaaagaaataatgcctcgtttgtctgactaa
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