Thiomicrorhabdus lithotrophica: NR989_08395
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Entry
NR989_08395 CDS
T09486
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
tlh
Thiomicrorhabdus lithotrophica
Pathway
tlh00450
Selenocompound metabolism
tlh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tlh00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
NR989_08395
Enzymes [BR:
tlh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
NR989_08395
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
NR989_08395
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WEJ62032
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Position
complement(1789721..1790950)
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AA seq
409 aa
AA seq
DB search
MSENSVDFSQVRAQFPILKVVENGQPLVYLDSGATSQKPLRVIEALDTYYRQENANVHRG
VYGLSERATEKYEGARETVKQFLNAKSTKEIVFVRGTTEAINLVAHSWVSENLTEGDEVI
VTEMEHHSNIVPWQLLRDKLGIRLTVLRMNQKGEVCLNALKGLVSEKTKFVSVTHMSNAL
GTINPVKEMVEIAHSVGAKIMIDGAQATPHMTVDVQDLDCDFYALSGHKMYGPTGIGVLY
AKEDLLEVMPPYQGGGDMIYSVTFDKTEYNVLPYKFEAGTPHISGAIGLAAAMDFLNEVG
LDNIAQHEAGLLAYATEQLSQIEGLRIIGEADKKGGVVSFVIEGVHPHDMATLMDQDGIA
VRASHHCAMPVMQHFNIPATIRASFGVYNNFEDIDRLITSINEAKEMLV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaatagtgtcgatttttcacaagtaagagctcagtttccaattttaaaagtg
gttgaaaatggtcaaccactagtctatttggatagtggtgcgacttctcaaaagccgtta
agagtaattgaggctttagatacttattatcgtcaagagaatgccaatgtacaccgtggt
gtctatgggttgagtgaacgcgcaactgagaagtacgaaggtgctcgagagactgttaaa
cagtttttgaacgcaaaaagtactaaagaaattgtgtttgttcgcggcactacagaagcc
attaatttagttgcgcatagttgggtgtctgaaaacttaacggaaggtgatgaagtcatt
gtgactgagatggaacatcactcaaatatcgtaccttggcagttattaagagataagtta
ggtatacgtcttaccgttttacgcatgaatcaaaaaggtgaagtgtgtcttaatgcccta
aaaggtttggtttcagagaaaactaagtttgtttctgtgactcacatgtctaatgcttta
gggacgattaaccctgtaaaagagatggtagagatagcacactcggttggcgctaaaatt
atgattgatggagcacaagcaaccccgcatatgacggttgatgttcaggatttggattgt
gatttttatgcgttatctggccataaaatgtatggtccaacgggtattggtgttttatat
gctaaagaagacttgttagaagtgatgcctccgtatcaagggggcggtgatatgatttat
tctgtgacctttgataaaacggaatacaatgttttgccatataaatttgaggcgggaaca
ccacatatttctggtgcaatcggtttagcagcagcaatggatttcttaaatgaagtgggt
ttagacaatatcgctcagcacgaagcagggttattagcttatgcaacagagcaactttct
caaattgagggtttgcgtattattggtgaggctgacaaaaagggtggtgttgtctctttt
gtcattgaaggcgttcatccccatgatatggcaaccttaatggatcaagatggtattgcg
gtgagagccagtcaccattgtgctatgccggttatgcagcatttcaatattccggcaacg
attagagcttcttttggtgtttacaataactttgaagatattgatcgtttgattacttca
ataaatgaagcaaaagagatgttagtttaa
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