KEGG   Thiomicrorhabdus lithotrophica: NR989_08615
Entry
NR989_08615       CDS       T09486                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
tlh  Thiomicrorhabdus lithotrophica
Pathway
tlh03030  DNA replication
tlh03430  Mismatch repair
tlh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tlh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NR989_08615
   03430 Mismatch repair
    NR989_08615
   03440 Homologous recombination
    NR989_08615
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tlh03032]
    NR989_08615
   03400 DNA repair and recombination proteins [BR:tlh03400]
    NR989_08615
Enzymes [BR:tlh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NR989_08615
DNA replication proteins [BR:tlh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     NR989_08615
DNA repair and recombination proteins [BR:tlh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     NR989_08615
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: WEJ62074
UniProt: A0ABY8C839
LinkDB
Position
1843180..1844061
AA seq 293 aa
MTPTTDLQNCINQLNQSGEYQVLSKLQAATEFNPPSSAPTHKVCIIDTETTGLDTDVCEI
IELGYQIIEFDSQGNFYKVLSAQNFLQEPKGEISEEVTQVTGLTMDDVKGHQIPWQQVEA
EIAEVQLCVAHNASFDRPVVERYSDVFVNKIWGCSVAQIDWMKQAHVGSRSQEFLCWKVG
EFFYGAHRALDDVQALTQLLSCKISEDKVPAFSFLLSAVRQSKSLVKATGAPFDIKDALR
SRGYRWNVGERVWQSVMDDAKLESELAWLIDNNTPNPNVIKLKATDSFSVRAR
NT seq 882 nt   +upstreamnt  +downstreamnt
atgactccaacaaccgatttacaaaattgcattaaccaactcaatcaatctggtgagtac
caagtactcagcaagctacaagcagcaacagagtttaaccctccttcttccgcacccact
cataaggtctgtattattgataccgaaaccacggggttagataccgatgtttgtgaaatt
attgaactgggttatcagattattgaatttgattcacaaggtaacttttacaaagtatta
agtgctcaaaactttttacaagaacccaaaggtgaaattagcgaagaagtcactcaagtc
actggcttaacgatggatgacgtcaaaggccatcaaattccttggcaacaagttgaagct
gaaatagccgaagttcagctatgtgttgcacacaatgcaagctttgaccgcccagttgtt
gaacgctatagcgatgtttttgttaataaaatctggggttgttccgttgcacaaattgat
tggatgaaacaagctcacgttggctctagatcacaagagtttttatgttggaaagttggt
gagtttttttacggtgcgcaccgtgctttagatgatgtgcaagccttaacgcaactttta
tcatgcaaaatttcagaagataaagtacctgcatttagctttttattgagtgccgttcgt
caaagcaaatctttagttaaggctacaggcgcgccgtttgatattaaagatgcattacgt
tctcgtggttatcgttggaatgtcggagaacgtgtttggcagtctgttatggatgacgcc
aagctcgaatccgagttagcttggttaatcgacaacaatacgccaaatcctaatgttatt
aaactcaaagcaacggatagtttttctgtccgcgctcgctaa

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