Thiomicrorhabdus lithotrophica: NR989_08925
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Entry
NR989_08925 CDS
T09486
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
tlh
Thiomicrorhabdus lithotrophica
Pathway
tlh00541
Biosynthesis of various nucleotide sugars
tlh01100
Metabolic pathways
tlh01250
Biosynthesis of nucleotide sugars
Module
tlh_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
tlh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NR989_08925 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
tlh01005
]
NR989_08925 (rfaD)
Enzymes [BR:
tlh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
NR989_08925 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
tlh01005
]
Core region
NR989_08925 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
WEJ62131
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Position
complement(1915053..1916021)
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AA seq
322 aa
AA seq
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MIVVTGGAGFIGSNIVKALNEQGRTDIIVVDNLKNGKKFINIADCNIADYLDKEDFQQRI
FAEQGLPDIEAVFHEGACSATTEWDGKFMMDNNYEYSKDVLNYCLNWKIPFFYASSASVY
GDGPDFIEERAYEKPLNVYGYSKFQFDQYVRQVLPKAQSQVVGFRYFNVYGPREQHKGDM
ASVAFKLHNQILAGESLKLFGEYDGYGAGMQTRDFVYIEDVVKVNLWFLAHPEKSGIFNL
GPAAAEPFKNIAEAVIDFHGKGEIEFIPFPEHLKGAYQSFTQADNSALRAAGYNEPFNNV
AQGVKKYLTWLTENPTVLNFTK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgattgttgtaacaggtggtgcaggttttattggaagcaatattgttaaggcgttaaat
gaacaaggccgtacagatattattgtggtggataacctaaaaaatggtaaaaaattcatc
aatattgcagattgcaacatagcagactatttggataaagaagatttccagcagcgtatt
tttgctgaacaaggcttaccagacattgaagcggtttttcatgaaggggcatgctctgct
accaccgagtgggacggtaaattcatgatggataataattatgagtactcaaaggatgta
cttaattattgtttaaactggaagattccattcttttacgcatcatcagcctcggtgtat
ggtgacgggcctgattttatcgaagaacgagcttatgaaaagccgttaaatgtttacggt
tactcaaaattccagtttgaccaatatgttcgtcaagttttacctaaagctcaaagccag
gttgtaggttttagatattttaatgtgtatggtcctagagaacagcataagggcgatatg
gccagcgtagcctttaagttacataatcaaattttagcgggtgaatcactcaaactattt
ggtgaatatgacggttatggcgctggtatgcaaactcgtgattttgtttatattgaagat
gtggtaaaagtgaacctatggtttttagcgcacccagaaaaatcaggtatttttaatcta
ggccctgcagcggcagaaccatttaaaaatattgccgaagcggtaattgattttcatggc
aaaggtgaaattgaatttatccctttcccagagcatcttaaaggtgcataccagagtttt
actcaagctgataactcggccttaagagcagcgggttataacgaaccgtttaataatgtg
gctcaaggtgttaaaaagtatttaacctggctaacagaaaacccaactgttttaaacttt
acaaaataa
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