Thiomicrorhabdus lithotrophica: NR989_10045
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Entry
NR989_10045 CDS
T09486
Name
(GenBank) class I SAM-dependent rRNA methyltransferase
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
tlh
Thiomicrorhabdus lithotrophica
Brite
KEGG Orthology (KO) [BR:
tlh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tlh03009
]
NR989_10045
Enzymes [BR:
tlh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
NR989_10045
Ribosome biogenesis [BR:
tlh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NR989_10045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUA_3
Methyltrans_SAM
Methyltransf_15
Cons_hypoth95
Methyltransf_31
MTS
FtsJ
Methyltransf_25
TRM5-TYW2_MTfase
PrmA
UPF0020
Spermine_synth
TRM
Methyltransf_24
Methyltransf_11
Methyltr_RsmB-F
Methyltransf_3
Methyltransf_10
Nucleoporin_FG2
Motif
Other DBs
NCBI-ProteinID:
WEJ62348
UniProt:
A0ABY8C8Q4
LinkDB
All DBs
Position
complement(2132122..2133315)
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AA seq
397 aa
AA seq
DB search
MLASLRLKKNEERRIKQGHVWVYSNEVDTQATPLKDFEPGQQVIIEASTGKPLGMGYVNP
NTLICARILSRSTKLDFNIKFLKKRIQAAQDLRELHFDQPFYRLVFGDSDGLPGLVIDRF
GDVFSVQITTAGMEVVKDDIVQVLENLYHPQAIVMKNDTASRKLEGLPLYEEVVLGELPE
SIIITENNTLFEIPVEDGQKTGWFYDHRCSRKRLQGLVKGKRVLDVFSYLGGWGVAAATA
GAESVTCVDASEFALDGVDHNAALNGVADKLTTIQGNAFDVLNALKAEAEKFDVVIVDPP
AFIKRKKDFKQGFEAYRRMNELAMRVLEKDGILVSASCSHHLTRDNLLQVVQSASRHIDR
NVQLFDQGHQGPDHPIHPAIPETEYIKTLFFKVSPSW
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgttagcgagtttacgattaaaaaagaatgaagagcgccgtattaaacaaggccatgtt
tgggtttatagtaatgaagtggatactcaagcgacaccgttgaaagactttgaacctggc
cagcaagtgattattgaagcctcaacaggtaaacctttaggcatgggctatgtaaatcca
aatacgttaatttgtgcacgtattttaagccgtagtaccaagcttgatttcaatattaaa
ttcctaaaaaagcgtattcaagcggctcaagatttacgtgaattgcattttgatcagcca
ttttaccgtttggtttttggtgattcagatggtttaccaggcctggtaattgatcgtttt
ggtgatgttttttcagtacaaattaccactgcgggaatggaagtagtgaaagacgatatt
gttcaggttttagagaatttgtatcaccctcaagcgattgtgatgaaaaacgataccgct
agtcgtaagcttgaaggcttacctctttatgaagaagtcgttttgggtgagttgccagaa
tctatcatcattacagaaaacaatacgctatttgaaatccctgtagaagatggtcaaaaa
acgggttggttctatgaccaccgttgctctcgtaaacgtttacaaggtttagtcaaaggt
aagcgtgttttagatgtatttagttatttgggtggttggggtgtcgcagctgctactgca
ggagctgaatccgtgacttgtgttgatgcttctgaatttgccttggatggtgttgaccat
aatgccgctttaaatggcgtagcagacaagttgaccaccattcaaggaaatgcgtttgat
gtactaaatgctcttaaagctgaagcggagaaatttgatgtggtgatcgttgatccgcca
gcttttattaagcgtaaaaaagattttaaacaaggttttgaagcttatcgtcgtatgaat
gaacttgctatgcgcgttttagaaaaggacggtattttggtttcagcatcttgttcacat
cacttaacacgcgataatctgttgcaagtggtacagtctgcttctcgtcatattgaccgt
aatgtgcagctgtttgatcaggggcatcaagggccagatcatcctatacacccggccatt
ccagaaacggaatacattaaaacgttattcttcaaagtttctcctagctggtaa
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