Thiomicrorhabdus lithotrophica: NR989_10330
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Entry
NR989_10330 CDS
T09486
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
tlh
Thiomicrorhabdus lithotrophica
Pathway
tlh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tlh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NR989_10330 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tlh03400
]
NR989_10330 (mutM)
Enzymes [BR:
tlh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NR989_10330 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NR989_10330 (mutM)
DNA repair and recombination proteins [BR:
tlh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NR989_10330 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
OrfB_Zn_ribbon
DZR
C1_2
Zn-ribbon_8
Zn_ribbon_SprT
Motif
Other DBs
NCBI-ProteinID:
WEJ62403
LinkDB
All DBs
Position
2204659..2205492
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AA seq
277 aa
AA seq
DB search
MPELPEVETTRKGITPKADQQVIKAFVVRNASLRWPVDLTLKQTLPGLVIQSIGRRGKYL
LLKTELGTLLIHLGMSGNLRVLPANTPPLKHDHVDIVLENGYLVRLNDPRRFGSVLWHPA
SEGSVETHKLLAKLAPEPLSDEFNEQYFYEKTRNRKVAIKTLVMNSAVAVGAGNIYANES
LFMSKIHPQTIASKLTKKQCELLVRNIKTVLEAAIEQGGTTLKDFMSPDGKPGYFVQKLN
VYDQGGKPCTVCGTTIERIILNQRASYFCPKCQKRSR
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattacctgaagtagaaaccacccgcaaaggcattaccccaaaagcggaccaa
caagtcatcaaggcttttgttgtacgtaatgcaagcttacgttggcccgttgatttaaca
cttaaacaaaccttaccaggcctggtaattcagtctatcggtcgaagaggcaagtatttg
ttactcaaaactgaactggggacgttactcattcatttgggcatgtctggcaatctaaga
gttttgccagcgaatacaccgccactcaaacatgaccatgtggatattgttctagagaac
ggttacctagttcgattgaatgatccacgtcgctttggttcggtactttggcaccctgct
tcagaaggttcggttgaaacacataagctcttagctaaattagccccagaacctttaagc
gatgaatttaatgaacaatacttttatgaaaaaacccgcaaccgtaaagtcgcaataaaa
accctggttatgaacagcgcggtagcggttggcgcaggcaatatatacgccaatgaatca
ttgtttatgagtaaaattcatccgcaaaccattgccagtaaactcacaaaaaaacagtgt
gaattattagtccgtaacatcaaaacagtgctcgaagctgctattgaacaaggtggaacc
acccttaaagactttatgtctcctgatggcaaaccaggttattttgtgcaaaaactcaat
gtatatgatcaaggtggtaaaccttgcacagtatgcggaacaaccattgagcgcataatc
cttaatcaaagagccagttatttttgccctaaatgccagaagcgtagtcgctag
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