Thiomicrorhabdus lithotrophica: NR989_11105
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Entry
NR989_11105 CDS
T09486
Name
(GenBank) site-specific integrase
KO
K14059
integrase
Organism
tlh
Thiomicrorhabdus lithotrophica
Brite
KEGG Orthology (KO) [BR:
tlh00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
NR989_11105
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GFIT
Motif
Pfam:
Arm-DNA-bind_2
Phage_integrase
Phage_int_SAM_3
Phage_int_M
Phage_int_SAM_5
Phage_int_SAM_4
Int_N
AIF-MLS
Methylase_S
Motif
Other DBs
NCBI-ProteinID:
WEJ62549
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Position
complement(2388843..2390147)
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AA seq
434 aa
AA seq
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MGSVRTRKDTLFFDFRFLGERCREQTTLPDTKPNRKRLETILARIEAEITLGTFEYGKYF
PNSSMVNKMAEIQAKQKPGYTKTPLFKAFAIEWYSEMEPTWRTSTAETYQRYIDKRLIPH
FGEMEVSQITKAHILKYRSNVAKQSDGKLKPKTINKFIKCLNMIMNEAADRYKFTPPHLN
IKPLKEEKVHIQPLSIQEVNLILANVRPDWRDYLLVRFFTGMRTGEIDGLKWENVDFERR
EILVRETFSMGRWEYTKNDGSQREIEMSTLVYNTLQERYQNRDVSCEMVFHANNGSPVHT
PNFLRRVWTPLLAYLKIKYRKPYQTRHTAATLWLAAGENPNWIAKQMGHSTTTMLFSVYA
RYVPNLTRKDGSAMERLLASNIDGFHEPVNEAEKQADEELSVSVNQAQQSEAEEVAFWDQ
FLTPSQTSSMGGRY
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtgtaagaactagaaaggatacgttgttttttgattttagatttcttggtgag
cgttgccgagagcaaactacgttacctgacacaaaacctaaccgcaaaaggctggaaact
atattggcacgtattgaagctgagattactttgggaacgtttgagtacggtaaatatttc
ccaaacagttcaatggtaaataagatggccgagattcaagcaaagcaaaagcctggttac
acaaaaacacctttgtttaaagcgtttgcaatcgagtggtattcagagatggaaccaaca
tggcgaacttcaacagccgaaacttatcagcgttatatcgataagcgacttattccgcat
tttggagaaatggaagtcagccaaatcaccaaagctcacattttaaagtaccgttctaac
gtcgccaaacaatcggacggtaaattaaagccaaagacgataaacaagtttatcaagtgt
ctgaatatgattatgaatgaagcagctgaccgatacaagtttacgccaccgcatttaaat
atcaagccccttaaagaagagaaagttcatattcagccactttcaattcaagaagtgaac
ttgatattggcgaacgttcgacctgattggcgtgattatttgcttgtgagattctttaca
gggatgcgcactggggagattgacggtcttaaatgggagaatgttgattttgaacgacgt
gagattctcgtgcgagaaaccttctcaatggggcggtgggaatacaccaaaaacgatggc
tctcaacgtgagatagagatgtcgactttggtttataacacgcttcaggaacgttatcaa
aaccgtgatgtatcgtgtgagatggtatttcacgccaataacggctcaccggttcataca
cctaactttttaagacgtgtttggacaccactactggcttatctcaaaattaagtaccgt
aaaccttatcaaactcgccacacagctgccacgctctggttagcggcaggagaaaacccc
aactggattgccaaacagatgggacacagtaccaccaccatgctcttcagcgtctatgca
cgttatgtgcccaacctcactcgtaaagacggttcggctatggagcgattattggcttcc
aatattgatggttttcatgagccagtaaacgaggctgaaaaacaagctgatgaagaatta
agcgtatcggttaatcaagcgcaacaaagtgaagccgaagaagtggctttttgggatcag
ttcttaacacccagtcaaacttcttcaatgggaggacgttactaa
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