Thiomicrorhabdus lithotrophica: NR989_11280
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Entry
NR989_11280 CDS
T09486
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
tlh
Thiomicrorhabdus lithotrophica
Brite
KEGG Orthology (KO) [BR:
tlh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tlh03021
]
NR989_11280 (rpoH)
Transcription machinery [BR:
tlh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NR989_11280 (rpoH)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
GntR
UCR_14kD
FGAR-AT_N
Motif
Other DBs
NCBI-ProteinID:
WEJ62580
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All DBs
Position
2426196..2427080
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AA seq
294 aa
AA seq
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MTITTYPQGNQATSLPSVHALSSQLVPGQNLETYLHTIQSVQKLTAEEENALAEKLYYQE
DVEAARQLILSSLRYVVPVARSYSGYGLPLGDIIQEGNIGLMKAVKRFNPEENVRLMTFA
VHWIRAEINEYVIKNWRIVKTATTKAQRKLFFKLRSTKKSLEWFNDKDADTVAEELGVTR
KDVLEMETRLYGKDLPVDMSADDDENTTFPILISQEADPETALVKQNYADYEMARMQQAL
ATLDDRSRSILQQRWLTEDKVGLKALSEEFGVSMERIRQIEAQALNKLKNQLIA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgactattacaacttaccctcaaggtaatcaggcaacaagcttaccttcagtacatgcg
ttgtctagccagctagttccaggccaaaacctggaaacttatttgcacacaattcaaagt
gttcaaaaattaacggctgaagaagaaaacgccttagctgaaaaattatattatcaagaa
gatgttgaagcggctcgtcagctgattttatcttcattacgctatgttgtgcctgtcgct
cgctcatatagcggttacggcttacctcttggcgatatcatccaagaaggtaatatcggt
ttaatgaaagcggttaaacgttttaacccagaagagaacgttcgtttaatgacgtttgcg
gttcactggattcgtgcagaaattaatgagtacgtgattaaaaattggcgcattgttaaa
acggctacaaccaaagctcagcgtaaattattttttaagcttcgtagcactaagaaatct
ttagagtggtttaacgataaagatgctgatacggttgctgaagaattgggcgtaacccgt
aaagatgttctagagatggaaacacggctttatggtaaagatttgccagtggatatgtct
gcagatgacgatgaaaacacaacgtttccgatattaatcagtcaagaagcggaccctgaa
acagcattagttaagcaaaactatgccgactatgaaatggcgcgaatgcagcaagcatta
gcgactttagatgatcgtagtcgtagtattttgcagcagcgttggttaacagaagataaa
gtcggtttaaaagctttatctgaagagtttggtgtttcaatggaacgtattcgtcagatt
gaagctcaagcgttaaataaattaaaaaaccaattgattgcttaa
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