KEGG   Thermovirga lienii: Tlie_0240
Entry
Tlie_0240         CDS       T01644                                 
Name
(GenBank) CRISPR-associated protein, Cas6 family
  KO
K19091  CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
Organism
tli  Thermovirga lienii
Brite
KEGG Orthology (KO) [BR:tli00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tli02048]
    Tlie_0240
Prokaryotic defense system [BR:tli02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-A factors
    Tlie_0240
   Subtype I-D factors
    Tlie_0240
SSDB
Motif
Pfam: Cas_Cas6_C Cas6_I-A
Other DBs
NCBI-ProteinID: AER65981
UniProt: G7V6F2
LinkDB
Position
251233..252003
AA seq 256 aa
MIELRLRVKFKIKPGSTIDFNYQWHITAMVYKVLSVSAPEFSKQLHDSGYPHLAGPDFKF
FTFSTLWAGRGATTVVGKRLCFESDSLLWRFDTPVAVVSSLLAEGLMSLGEVRIGSLNAE
VGQIIDEPMPDFSDGFATFSCISPLVSSVPDAKLGHKYLDPKDNQFWEVLRGNLIKKWET
LYRKPFQGEVKLQPDWEYIKTRKTSKLISLKGRYLIRGHLVPFAVEGAPQIIALGYSAGF
GGRNSLGFGMVEVAKG
NT seq 771 nt   +upstreamnt  +downstreamnt
gtgattgagctgagattgagggtcaaattcaaaatcaaaccaggctctacgatagatttt
aattaccagtggcatataaccgccatggtatataaggttttatctgtatcggctccagag
ttcagcaaacagcttcatgattcgggatatcctcatttggctggtccggattttaagttt
tttaccttcagcactttgtgggcaggtagaggagctacaactgtggtaggtaagaggctt
tgctttgaatcggactctctgctttggcggtttgatactcctgtagcagtagtttcttct
cttttggcagaagggctgatgtcccttggcgaagtgcgtattggaagcctgaatgctgag
gtaggacagattattgacgagccaatgcctgatttctctgatggttttgccaccttttct
tgcatctcccctcttgtatcgagcgtcccagatgccaagttgggacacaaatacctagac
cccaaggataatcagttctgggaggtgttgaggggcaatttaatcaagaaatgggaaaca
ttgtacaggaaacctttccaaggtgaagttaaactgcagccggactgggaatatataaag
acaagaaagacaagtaaattgatttcgctaaaaggtcggtacctaattagaggccatttg
gtgccttttgcggtggagggagcgcctcaaattatagcccttggctacagtgcaggtttt
ggggggcgcaatagcttaggatttggaatggttgaagttgccaaaggttaa

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