Thermovirga lienii: Tlie_0545
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Entry
Tlie_0545 CDS
T01644
Name
(GenBank) surface antigen (D15)
KO
K07277
outer membrane protein insertion porin family
Organism
tli
Thermovirga lienii
Brite
KEGG Orthology (KO) [BR:
tli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tli03029
]
Tlie_0545
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tli02000
]
Tlie_0545
Mitochondrial biogenesis [BR:
tli03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
Tlie_0545
Transporters [BR:
tli02000
]
Other transporters
Pores ion channels [TC:
1
]
Tlie_0545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POTRA
Omp85
ShlB
POTRA_2
FAINT
Motif
Other DBs
NCBI-ProteinID:
AER66280
UniProt:
G7V8B8
LinkDB
All DBs
Position
582021..583802
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AA seq
593 aa
AA seq
DB search
MGSKFAGRGVSLVRKLLSFVLLSGALLLCFASFSFAQNPLVVGVGVSGNKEVASNFILSV
VETKVGEPLDREVVQKDIDNIYGLGFFSLVDVNVTPQSGGVYVEYEVVENPTIKEIVFEG
NTVYSSEELMEYVFSKPGSVFNRVFFRHDLQRIKEKYEKDGYTLVRMEDVTFEDGVVKIK
IVEPRVGDIIIQGNKKTKTFVIKREILLKKGDLFNAVLVRHSLNNLNQLGFFEDVSLGFE
PNEENPDMVNLVFTVTEQKTTKVGLSIGHGSSSGWTGGATLTETNYKGLGQRAEIGFETG
DREQYWISFTEPYMDQEHYSWKVGVYKRSWEDLEEYEDGTLQHYYDEDKKGAYFGIGKKF
RSDDRLSWYALLDWHDVEIFNVRNPDETPGTMVDDEDRVGTNYSITGTFTYNDMVKYISY
PDGAVYKLNVEQGYFEPDDGDKMDYTKYWIETRYYRPLKDFLSGIMDNLDIGSEDNPVIF
ATRLRYGSSSGQVPWSEQYFLGGSSTLRGYNDDEFEGDEMALLNAELRVPVKDAFSVVFF
YDTGMASDNFSFSDLKDAYGIGVRVRTPLGNLRLDVAEGEYETVTHFGFGEMF
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgggtagtaaatttgcgggaaggggtgtttccttagtgagaaagcttttgtcgtttgtt
ttattatcaggtgccttgttattgtgctttgcatcgttttcctttgctcaaaaccccctg
gtggtaggagttggtgtgtccggtaacaaggaagtagcttccaatttcatattaagtgta
gttgaaaccaaggtaggagagcccctggaccgcgaagtggttcagaaggacatagacaac
atatacggcttgggatttttctccctggtcgatgtgaatgtcacccctcagtccggcggg
gtatacgtggagtatgaagtggtagagaaccccaccatcaaggaaatagttttcgaggga
aacacggtctattccagtgaggagctcatggagtacgtattctccaagcctggaagcgtg
ttcaatagggtctttttcaggcacgacctgcagaggataaaggaaaagtacgaaaaggac
ggttacactttggtgaggatggaggacgtaacctttgaggatggcgtagtaaagataaag
atcgtcgaacccagggtgggcgacatcattattcagggaaacaaaaaaaccaagaccttc
gtaataaagcgagagatactcctcaagaaaggggatctattcaacgccgtcttggttagg
cactcgctgaacaacctcaaccagcttggcttcttcgaggacgtcagcttgggatttgaa
cccaacgaggaaaaccccgatatggtgaacttggtgttcacggttaccgagcagaagacc
acaaaggtcggcctttccataggtcacggttccagtagcggatggaccggaggcgcgacc
ttgaccgagaccaactacaaaggccttggacagagggccgagattggatttgagactgga
gacagggagcagtactggataagcttcactgagccctacatggaccaggagcattactcc
tggaaggtcggagtttacaagagaagctgggaggaccttgaggagtacgaagatggaacg
ctccagcactactacgacgaggacaagaaaggggcttacttcggtataggcaagaagttt
cgttccgacgataggcttagctggtatgcccttttggattggcacgatgttgagatcttc
aacgtgaggaaccctgacgagactccagggacaatggtggacgatgaggatcgcgtaggg
accaactactccattacgggcactttcacctataatgacatggtgaagtacatatcctat
cctgacggggcagtgtacaaattgaacgtcgaacagggctactttgagccggacgacgga
gacaagatggattacaccaagtactggatagagactagatactacaggcccctcaaggac
tttttgtcggggataatggacaatctggacatcggttccgaggataacccggtgatattt
gcgacccgactgaggtatggttcttcttccggtcaggttccgtggtctgaacagtacttc
ctgggtggatccagcacgttgagagggtacaacgacgacgagttcgagggtgatgagatg
gcccttttgaacgccgaactaagagtaccagtcaaggatgctttctccgtggttttcttc
tacgacacaggtatggcatcggacaacttcagtttctctgacttgaaggatgcttacgga
atcggggtcagggttcgtaccccactgggcaatctaaggctggatgtagccgagggagaa
tatgagacagttactcattttggctttggggagatgttctag
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