Thermovirga lienii: Tlie_0556
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Entry
Tlie_0556 CDS
T01644
Name
(GenBank) ABC transporter related protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
tli
Thermovirga lienii
Pathway
tli02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tli00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Tlie_0556
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tli02000
]
Tlie_0556
Enzymes [BR:
tli01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Tlie_0556
Transporters [BR:
tli02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Tlie_0556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_22
AAA_16
AAA_23
Zeta_toxin
DUF87
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
AER66291
UniProt:
G7V8C9
LinkDB
All DBs
Position
592865..594625
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AA seq
586 aa
AA seq
DB search
MASKWKKSLYLRLLNYARPYMSRIGVGLVCMVLSSVFTVVAPWILKNIVDDVLISKNLLM
LNVLSLGLVLLYLLKNVANYGHQYLMNWVGQKVVMDLRLELYDHMQRMSLRYIYGSRVGE
LVSRITNDVVKLQEMVTTAVIDLVVQGLSFVGMLGFLVYLNWKLTAITFMVLPVAAWVLD
VASRKLRAVGYDIQSQLAALSAIAYEALSSIRIVRSFATEDEEYDRFKDRNQAHFKALMR
GTQVNAALSGIIEVILIGALSLILWFGGRIVVAGEMTPGELIAFLGYLALLVQPIRTFSK
VVAKIQQGMASAERIFEVMDTKSEITPPKKPIVLSHITGKVDYKNVSFAYEDERWILRNI
NISAYPGEKIAIVGPTGAGKSTLVDMIPRFYDPQRGGVFIDGIDVRKLDLKSLRRQIGIV
PQDPILLKGSISYNIAYGLPGATLKSIKKAAEMAGIGAFIESLPRGYDTEVGERGVTLSG
GQRQRLAIARAIIRDPRILILDEATSSLDAMVEQEIQMALKKASEGRTTFVIAHRLATVK
EADRILVLDKGSIVEEGTHDVLIKNGGLYARLCELQFGDVNGKDIN
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggctagtaaatggaagaagagtttgtatttgaggcttttgaactatgccaggccttac
atgtccaggataggggttgggcttgtctgcatggtgttgtcctcggtgtttaccgttgtg
gctccgtggatactcaagaacattgtggacgatgttttgataagcaagaacctattaatg
ctcaacgttctatctttaggtttggtgcttttgtacctgttgaagaacgtggcaaattat
ggccaccagtacttgatgaattgggttggccagaaagtggtgatggacctcaggcttgaa
ctttatgatcacatgcagaggatgtccctacggtacatctacggctccagggtgggggaa
ctggtttcccgcatcaccaacgacgtggtcaaactccaggagatggtgaccaccgcggtc
atagacctggtggttcaggggttgagcttcgtgggcatgttgggttttctggtctacctc
aactggaagcttacggccattaccttcatggttctgcccgttgcggcgtgggtgttggat
gtggcatccaggaagttaagagccgtggggtatgacattcagagtcagcttgcagctctt
tcggcgatagcctatgaggccctctcgagcatcaggatagttcgttcctttgccacagag
gacgaagaatatgacaggttcaaggatcgcaaccaggcccatttcaaggctttgatgagg
ggcacccaggtcaacgctgccctttcgggcataatagaggtcatattgataggagctttg
tccttgatcctttggtttggcggcagaatagtcgttgcgggcgagatgacccctggagag
ctgatagcctttttggggtatttggccctcttggttcaacccataaggacattttcaaag
gtcgtggccaagatacagcagggaatggcctcggcggagcgaatattcgaggttatggac
actaaaagcgagataacaccgcccaaaaagcccatagtgctctcacatataacgggaaaa
gtggactacaagaacgtgtcctttgcttatgaggatgagcgttggatactaaggaacata
aacatttccgcctatcctggggagaagatagccatagtggggccgacgggagcggggaaa
tccacattggtggatatgatacccaggttctatgatccccaaaggggaggggtcttcata
gatggaatagatgttcgcaagctggacctaaaatccctgaggaggcagataggcatagtt
ccccaggatcccatcctgctcaagggcagcatatcctataacattgcctatggtttaccc
ggagccaccctaaagagcataaaaaaagcggccgagatggcgggaataggagctttcatc
gaaagccttccaaggggttacgatacggaggtcggggaaagaggcgtaacattgagtggc
ggtcagcgccagaggcttgccatagccagggccataataagagatcctcgaatactgata
ttggatgaggcgacatcctcccttgatgccatggtggagcaggaaattcagatggcgctg
aaaaaggcatctgagggcaggactactttcgttatagcccacaggctggccacggtaaaa
gaggccgatcggatattggtcctggacaagggatccatagtagaggaaggaactcatgac
gttttgataaaaaatgggggcctgtatgccaggctctgtgaacttcagtttggagatgtc
aatgggaaggatattaattga
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