Thermovirga lienii: Tlie_0559
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Entry
Tlie_0559 CDS
T01644
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
tli
Thermovirga lienii
Pathway
tli00541
Biosynthesis of various nucleotide sugars
tli01100
Metabolic pathways
tli01250
Biosynthesis of nucleotide sugars
Module
tli_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
tli00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Tlie_0559
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
tli01005
]
Tlie_0559
Enzymes [BR:
tli01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
Tlie_0559
Lipopolysaccharide biosynthesis proteins [BR:
tli01005
]
Lipid A
Tlie_0559
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
NeuB
Motif
Other DBs
NCBI-ProteinID:
AER66294
UniProt:
G7V8D2
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All DBs
Position
597601..598455
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AA seq
284 aa
AA seq
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MVRSFSLGNYKVGEGRLLVAAGPCVLESLDVALEVAQTAGRICSSLGLDYVFKSSFDKAN
RTSIHSYRGPGMEKGLNWLAEIKAKTGFPILTDIHEPWQAARVAEVADILQIPAFLCRQT
DLLVAAAKTGKVINIKKGQFLSPWDMAQAARKCMEAGNNRIILCERGTTFGYNQLVVDMR
SLPIMRSFGYPVMFDGTHSVQMPGGQGERSGGDRRFVLPLVRAAVAVGIDALFLETHPEP
DKAKSDGPNMVLLSELEKLLKQVKKLHDVVQTIGYVKLSEEARS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggtaaggagtttttctttaggaaactataaagttggagagggcaggctgcttgtggca
gccggcccttgcgtgctggagagcctggatgtggcccttgaggtggcccagacggcgggc
aggatatgcagcagcttggggctggattacgtcttcaagtcgtccttcgataaggccaac
aggacgtccattcacagctatcgcggcccagggatggagaaggggttgaactggcttgcc
gagataaaagcaaagacaggttttcccatattgaccgatatccatgagccctggcaggcc
gcgagggttgcagaggtggcggatattcttcaaattcctgcctttttgtgcaggcagacg
gatttgctggtggctgcggccaagacgggcaaggtgataaacataaagaaggggcaattt
ttgtctccgtgggatatggcccaggctgcgagaaagtgcatggaagcgggaaacaacagg
ataattttgtgtgagagggggaccacgttcggctacaaccagctggtggtggacatgcgc
tctctgccgataatgaggtcctttggttatcccgtgatgttcgacggtacccacagcgtt
cagatgccgggaggccagggggaaaggagcggaggagacagaaggttcgttctgcccctg
gtaagagcagcggtggcggtaggaatagatgcccttttccttgagacccaccctgaaccg
gacaaggccaaaagcgatggccccaacatggttttgctttccgaattggaaaaactcctg
aaacaggtcaaaaagctgcacgatgtggtccaaaccataggttacgtgaaactttcggag
gaggcacggtcatga
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