Thermovirga lienii: Tlie_0601
Help
Entry
Tlie_0601 CDS
T01644
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tli
Thermovirga lienii
Pathway
tli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Tlie_0601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tli03019
]
Tlie_0601
03110 Chaperones and folding catalysts [BR:
tli03110
]
Tlie_0601
03029 Mitochondrial biogenesis [BR:
tli03029
]
Tlie_0601
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tli04147
]
Tlie_0601
Enzymes [BR:
tli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Tlie_0601
Messenger RNA biogenesis [BR:
tli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Tlie_0601
Chaperones and folding catalysts [BR:
tli03110
]
Heat shock proteins
HSP60 / Chaperonin
Tlie_0601
Mitochondrial biogenesis [BR:
tli03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Tlie_0601
Exosome [BR:
tli04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Tlie_0601
Exosomal proteins of other body fluids (saliva and urine)
Tlie_0601
Exosomal proteins of breast cancer cells
Tlie_0601
Exosomal proteins of colorectal cancer cells
Tlie_0601
Exosomal proteins of bladder cancer cells
Tlie_0601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AER66336
UniProt:
G7V8P5
LinkDB
All DBs
Position
640472..642091
Genome browser
AA seq
539 aa
AA seq
DB search
MPKMLAFNEEARRALERGINKVADTVGVTLGPKGRNVVLEKKFGSPTITNDGVTIAKEIE
LEDPFENMGAQLLKEVASKTNDVAGDGTTTATILARAMINEGMKNVAAGANGMLMRRGIE
KAVDVVVDELKKLAIPVKEKEKIAQVAAISANDKAVGELIAEAMEKVGEEGVITVEDSQT
VGTTLEVVEGLQFDKGYVSPYMMTDAERMEASLEDAYILIHDGKISSVKDLIPLLEKVVQ
TGKPLLIIAEDIEGEALATLVVNKLRGVMQVVAVKAPGFGERRKAMLQDIAIVTGGQVIS
EDVGIKLENADLSMLGRAKKVRVTKEETTIVEGAGDPDAIRKRAAQIKAELEESTSEYDK
EKLQERLAKLVGGVAVIQVGAATETEQKELKHRIEDALNATRAAVEEGIVAGGGVALLNA
SEALDKFIEELEGDERTGAMIVKKALTAPVYLIATNAGYQGDVVIEKVKSLKKGHGLNAA
TGEYEDLVKAGIIDPVKVTRSALQNAGSIAAMVLTTEALVADKPKKENENPMPAAGMDY
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagatgcttgcttttaacgaagaagcccgtagagctttagagcgtggtattaac
aaagttgcagatacagtaggtgttacccttggtccaaagggtcgcaacgtagtcctggag
aagaagttcggttctcccacgataaccaatgacggtgtaaccatcgccaaggagatagag
cttgaggatccctttgagaacatgggagctcagctgctcaaggaagttgcttctaagacc
aacgatgtcgctggtgacggtactacgactgctaccattctcgctagggcaatgataaac
gaaggtatgaagaacgttgccgctggcgccaatggtatgctcatgcgcagaggtatagag
aaggctgttgacgtcgtggtcgatgagctaaagaaacttgctattcccgtcaaggaaaaa
gagaagattgcccaggttgcagccatatccgctaacgacaaggctgttggcgagctgatc
gccgaggccatggaaaaggttggagaagagggcgttatcactgtagaggatagccagacc
gtggggaccacccttgaggttgttgagggtctccagttcgacaaaggttatgtgagccca
tacatgatgaccgatgccgagaggatggaggcaagcctcgaggatgcttacatccttatc
cacgatggtaagataagcagcgtcaaggacctcattcctctccttgagaaggttgtacag
accggtaagcctctgttgataatcgctgaggacatagagggcgaggcccttgccaccttg
gtggtcaacaagctccgtggcgtgatgcaggttgtcgccgtaaaggctcctggcttcggc
gagagaaggaaagccatgctccaggatatagccatagtgaccggtggtcaggtcatctcc
gaggatgtgggcatcaagcttgagaacgctgatctatccatgctcggtcgcgctaagaag
gtccgcgtgaccaaggaagagaccaccatcgtagagggtgccggtgatcctgatgccata
aggaagagggctgcccagatcaaggccgaacttgaggagtccacttccgagtacgacaag
gaaaaacttcaggagcgccttgccaagcttgtcggtggcgtggctgtgatccaggttggt
gccgctactgagactgagcagaaggagctcaagcacaggatcgaggacgctctcaacgct
acccgcgcggcggtagaagagggtatagtagctggtggtggcgtggctctcttgaatgcc
tccgaggctctggacaaattcattgaggagctcgagggcgacgagaggaccggtgccatg
atagtgaagaaagctcttaccgctcctgtgtacctcatcgccactaacgctggttatcag
ggcgatgtggtcatagagaaggtcaagagcctcaagaagggccacggcctcaatgctgct
accggcgagtacgaggacctcgtgaaggccggtatcatcgacccagtgaaggtcacccgc
agtgcccttcagaacgctggctccatcgcggccatggtcttgacgaccgaagccttggtc
gccgataagccgaagaaagaaaacgagaaccccatgccagcagcaggtatggactactag
DBGET
integrated database retrieval system
