Thermovirga lienii: Tlie_0680
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Entry
Tlie_0680 CDS
T01644
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tli
Thermovirga lienii
Brite
KEGG Orthology (KO) [BR:
tli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tli03016
]
Tlie_0680
Enzymes [BR:
tli01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Tlie_0680
Transfer RNA biogenesis [BR:
tli03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Tlie_0680
Prokaryotic type
Tlie_0680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AER66415
UniProt:
G7V946
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All DBs
Position
715245..715997
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AA seq
250 aa
AA seq
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MARYAMQVSYKGKDFSGWQKQPNSRTVQGVLESALELLAGHPVTVYGAGRTDKGVHALGQ
VASFDLNRHWAPEKLLLAVNAHLPKDVRVMRMRYVDNSFHARYSALWREYVYFIWTGRVC
FPHFSDYVWHRKQKWDISKARRACKLFWGTKDYRAFCRKSECPPSAFRTIHKAEVFSRGD
LVWFRVRGDSFLTNMVRIMVGTLDYICTGKKDIDYLEELLQGKAERPDAGPTAPADGLFF
WRVGYPWSLW
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggcacggtacgctatgcaggtttcctataaaggaaaggatttctcagggtggcaaaaa
cagcctaactccaggaccgttcaaggggtgttggagagtgccctggagttacttgctggg
catccagttactgtttacggagctgggcggacggacaagggagttcatgcattaggacag
gtggcatccttcgacctgaataggcattgggcgccagaaaagcttcttttagctgtaaac
gcccatttgccgaaagatgtaagggttatgaggatgcgctatgtagataattcctttcat
gcccgctacagtgcgttgtggagggagtacgtatatttcatatggacagggagagtgtgt
ttccctcactttagtgattatgtgtggcacaggaaacagaaatgggatatatcgaaagcc
cgaagggcctgtaagcttttttgggggaccaaggactatagggcattttgtaggaaaagt
gagtgtccaccaagtgcctttagaaccatacataaggccgaggttttctctcgaggtgac
ctagtgtggttcagggtaagaggcgactcttttctaacgaacatggttagaataatggtt
ggaactttggattatatatgcacaggcaaaaaagatatagattacctcgaggaacttctg
cagggcaaagccgaaaggcccgatgcagggcctactgctccggcggatggcttgttcttt
tggcgggtgggttacccttggtctttgtggtag
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