Thermovirga lienii: Tlie_0757
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Entry
Tlie_0757 CDS
T01644
Name
(GenBank) Endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
tli
Thermovirga lienii
Pathway
tli03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Tlie_0757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tli03400
]
Tlie_0757
Enzymes [BR:
tli01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Tlie_0757
DNA repair and recombination proteins [BR:
tli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Tlie_0757
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
PRMT5_TIM
Motif
Other DBs
NCBI-ProteinID:
AER66490
UniProt:
G7V9E0
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All DBs
Position
792349..793191
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AA seq
280 aa
AA seq
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MSLIGAHMSIAGGLWKAIERGELLGCEAIQIFTKNQLQWYSSPLPQHIAERFLLVWSRSH
IRKVVAHASYLINLAGDEGVRRKSIESLVQEVKRCDQLGIDELVLHPGSHRGKGVEEGLR
LLSEALRDVLVRTEETRVRILLETMAGTGDGLGSTLEELEWVLNFMDRDPRLGVCVDTCH
VFASGYELRTAFAYEKLVQKLEKMFGLERIGCWHLNDSKEGRGSKKDRHHHIGEGEIGEQ
VFARIVSDPRWEDVPCILETPKENGSDVRNLTLLRKMRGS
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaataggagcccatatgtccatagcgggcggtctgtggaaagccatagaaaga
ggagaactgttgggttgtgaagcaatccagatctttaccaagaaccagctgcaatggtat
tcgtcccccttgccccaacacattgcagaaaggtttctgttggtctggagtcgtagccat
atccgcaaggtagtggctcatgcttcttatttgattaatttggctggggacgagggagta
agaaggaagagtatagagtccttggttcaggaggtaaaaaggtgtgatcaacttggaatt
gacgagttggttttacaccctggatcccacaggggaaaaggggtagaagaagggctcaga
ttgctttctgaagctttgcgtgatgtgcttgtcaggactgaggagaccagggttaggatt
cttcttgaaaccatggcaggaactggagatggtttaggttccactcttgaggagctggaa
tgggttttgaatttcatggatagggatcccagacttggtgtgtgcgtcgacacttgtcat
gtttttgcttctggttatgagttgcgcacggcctttgcgtatgagaagcttgtgcagaag
ttggagaagatgttcggactggaaaggataggatgttggcatcttaatgacagcaaggaa
ggacgaggaagcaaaaaggacaggcaccaccatattggagagggtgaaataggagagcaa
gttttcgccaggatagtaagcgaccctagatgggaagatgtgccctgtatcttggaaacg
ccgaaagaaaatggatcagatgtacggaatctgaccttgttgaggaagatgagaggctct
taa
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