Thermovirga lienii: Tlie_1029
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Entry
Tlie_1029 CDS
T01644
Name
(GenBank) SpoIID/LytB domain protein
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
tli
Thermovirga lienii
Brite
KEGG Orthology (KO) [BR:
tli00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tli01011
]
Tlie_1029
Enzymes [BR:
tli01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Tlie_1029
Peptidoglycan biosynthesis and degradation proteins [BR:
tli01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Tlie_1029
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
Motif
Other DBs
NCBI-ProteinID:
AER66762
UniProt:
G7VA62
LinkDB
All DBs
Position
complement(1089512..1090885)
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AA seq
457 aa
AA seq
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MRKEPNLFKVCILSLVFAFIVGLVGIETAWATGTSLKIGLATNQRTGYVFSKSMLYFKDA
SGKSFKASGKVLLKTNSPKKIYVNDKSATLPLAITSKTPIYWENRPYRGWLQIYPSSQGF
NVINVISVEQYLRGVLKMEVNPAWQMEALKAQAVVARTYALRNKGKHSSQGFDLCALPHC
QVYRGINAEDPKLDRAITSTKGLVLYYGSKLAVTPYHSDSGGYTANVWDVWSGNIPYLKA
QKEPFSYVSPYSNWRAVIPLGELESKLKKNGINLGKIQRITIAKRDEGGRAVSILIEGTG
GRKTIKASKFRMIAGSDKIRSTNFEIKGVGKNRSTPTGRLSNQLSEEAVLNDHDGKLLSS
LVKEGVFSTEELMDMLVHPERKPHYLRVALQRQSGTKSKTSYYFASSNDNALVLEGRGWG
HGVGMSQWGAKSMAEHGWDFKKILMYYYPGTKLKKIY
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaagagcctaatctttttaaagtttgcattttaagtttagtgtttgcctttatt
gtggggttggttggtatagaaacggcatgggccactggcacctccttgaagattggccta
gcgacgaaccaaagaacagggtatgtcttttccaagagcatgctttatttcaaagacgcc
tctggaaaaagttttaaggcttcaggaaaggttcttttaaagaccaactctcctaaaaaa
atatacgtaaatgacaagtccgccactttacctctagctatcaccagtaaaactccgata
tattgggaaaatcgcccgtacagaggatggctacaaatttatccttcttctcagggattc
aacgtcatcaacgtgataagcgtggagcaataccttaggggagtcctcaagatggaggta
aaccccgcttggcaaatggaagctttaaaggcccaggctgtagtggcgaggacctatgct
ttgagaaataaagggaaacatagctcgcagggattcgatctctgcgcattgcctcactgc
caagtctacagaggaataaacgcagaagatcccaaactagacagggcaataaccagcacc
aagggtttggtgctctattacggaagtaaactggcagttacaccttaccattctgacagc
ggaggatacactgcaaacgtctgggacgtttggagtggtaacattccttaccttaaagcc
caaaaggaacccttttcgtacgtatctccttattccaattggagagcagtcatacctttg
ggcgaacttgaaagcaaactaaagaaaaatggtatcaaccttgggaaaatacaacggata
actatagcaaaacgagatgaaggaggaagagcagtttccatactgattgaaggaaccggt
ggaagaaaaacaattaaggccagtaaatttagaatgatagctggtagcgacaaaattaga
agcactaacttcgaaatcaaaggagtaggcaaaaatcgttccacccctactgggagactt
tcaaatcagctttctgaagaggctgtacttaatgaccacgatgggaagctattgtcctcc
ctcgtcaaagaaggagttttctctacagaagaactaatggacatgctggtacatcctgaa
aggaaaccccactatctcagagtagctcttcaaagacaaagtgggacaaaatcaaagaca
tcttattattttgcttcgagcaatgacaacgctttggtcttggaaggtaggggttggggg
cacggcgttggaatgtctcagtggggagctaaatccatggctgaacacggttgggacttc
aaaaaaatactcatgtactactatcctggaaccaaactgaagaaaatatattga
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