Thermovirga lienii: Tlie_1174
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Entry
Tlie_1174 CDS
T01644
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tli
Thermovirga lienii
Pathway
tli03420
Nucleotide excision repair
tli03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Tlie_1174
03430 Mismatch repair
Tlie_1174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tli03400
]
Tlie_1174
Enzymes [BR:
tli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tlie_1174
DNA repair and recombination proteins [BR:
tli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Tlie_1174
MMR (mismatch excision repair)
Other MMR factors
Tlie_1174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
PhoH
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
AER66905
UniProt:
G7V5C2
LinkDB
All DBs
Position
complement(1231331..1233310)
Genome browser
AA seq
659 aa
AA seq
DB search
MKIETSKLLESLNKEQAEAVKHTDSSMLVLAGAGSGKTRVLAHKFAYLVAEEGIHPSRIL
AVTFTNKAAREMRHRVQTLIGEMGTSLEVSTFHSFGLRFLMRHAKRMERLLGRKMKTIFD
RQDSKSLLKGIIKDVNLDPKKYEVNWVMEEISKSKSDVLPPYYDYRKLTSPLDMVMEKYE
DHLKAQGAADFDDLLVLPLKLLHMDKELRELEQSRYAWILVDEYQDVNRLQYLLLKTLKG
KDSKIMVVGDPDQSIYGWRGADMRMILNFDKDFPDSKVFMLQRNYRSTKTILEAANAVIR
NNLQRPDKVLWTDREKGEPISVFLARNEHEEAAFITDEILRLRSQGYRWNEMAVLYRVNA
MSRLYEEYFLRNGVPYSILKGTAFYERKEVKDILAYMRLIVNPLDAVSLQRVGNVPARGL
GPKSMSKLISYINGIGYMEPEEVWEELSKSGANLGGKAATGVKALAKDMLNMLRIKNDIP
GIINYILREMEYEKTFDGESTEKRQERVENIYELVSVADTSEGLESMLAGITLLTDMDLS
KETSPDKVNMLSLHAGKGLEFPVVFLVGMEESIFPHYKCIDDKELLEEERRLCYVGMTRA
EEKLYLTAARSRVLFGTLSRNGFSRFLWEIPESLKETKDQGEEVCPDVRGGFDRRRWGW
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagaaacgtcaaaacttcttgaatctttgaacaaggagcaagctgaagcggtt
aaacatactgatagctcaatgctagttcttgctggagctggaagtggcaaaacaagggtt
ctggctcataagtttgcgtatttggtggcagaggaaggcatacacccatcaaggatactg
gccgtgactttcaccaataaggcggcgcgagagatgaggcatagagtgcagacccttatc
ggtgagatgggtacctccctcgaagtttccacctttcattcttttggtttgcgctttttg
atgaggcatgccaagaggatggagaggcttttgggtagaaagatgaagacgattttcgat
agacaggattccaagtcgctgctgaaagggataataaaggatgtcaacctagatcccaaa
aagtacgaagtaaattgggttatggaagagatatcgaagagcaaatcggatgtcctgcct
ccttattatgattatagaaaattgaccagtcctttggacatggtcatggagaagtatgaa
gatcatctcaaggcacagggtgcagcagattttgatgatctcttggttttgcctctgaag
cttttacatatggacaaagaactaagggagcttgagcagtctcgctatgcctggatattg
gtggatgagtaccaggatgtcaaccgactccagtacctcttgctgaaaactctgaagggc
aaagacagtaaaatcatggttgtgggagatcctgaccagtccatttatggatggcgtgga
gccgatatgaggatgatcttaaattttgataaagactttcctgactccaaggtgtttatg
cttcaaaggaattacaggtcgactaagaccatattagaggcagcaaacgcagtcataaga
aataatttacaaaggccagacaaggtcctttggacagatagggaaaagggagagccgatt
tccgtctttttagcccgcaatgaacacgaagaagcggcgttcattacggatgagatccta
agattgcggtcccaagggtatagatggaacgagatggccgtgctttatagggtaaacgcc
atgagccgactctacgaggaatatttcttgagaaatggggtgccctacagcattctcaaa
ggaactgccttctatgaaaggaaagaagtaaaggatatcttggcttatatgcgcttgata
gttaaccctctggatgctgtttcattacagcgggttggtaacgtgcctgcaagaggatta
ggccctaagagtatgagcaagttgatttcctatatcaatggaatcgggtacatggaacca
gaagaggtgtgggaagagttatctaagagcggagctaatcttggagggaaagctgccact
ggagtaaaggcccttgccaaggatatgctgaatatgttgcgaattaaaaacgatatccca
ggcatcataaactacatcttgagagagatggagtatgagaagacctttgatggcgaatca
acggagaaaagacaggagagggtagaaaacatatatgaacttgtgtctgtggccgataca
agcgaaggcttggagtccatgttggcggggataacccttttgacagatatggatctttcc
aaggagacaagtccagataaagtaaacatgttgagtttgcacgctgggaagggattggag
ttccctgtagtattcctagttggcatggaagaatcaatatttcctcattataaatgcatt
gacgataaggagctattggaggaagaacgaaggctttgttacgtgggtatgaccagagca
gaagaaaaactataccttacggcagcccggagccgagttctctttggtactctttcccgg
aatggattctctaggttcttgtgggaaataccagagagcctgaaggagacgaaagatcag
ggagaggaggtctgcccagatgttcgtggtgggtttgacaggcgacgttggggctggtaa
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