Thermovirga lienii: Tlie_1260
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Entry
Tlie_1260 CDS
T01644
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
tli
Thermovirga lienii
Brite
KEGG Orthology (KO) [BR:
tli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tli03016
]
Tlie_1260
Enzymes [BR:
tli01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Tlie_1260
Transfer RNA biogenesis [BR:
tli03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Tlie_1260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AER66991
UniProt:
G7V604
LinkDB
All DBs
Position
complement(1317144..1318469)
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AA seq
441 aa
AA seq
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MNSYAIKVYGCQMNVYDAERLRTAMAKEGFSEVSLEEKPELVIFVTCSIREKAEQKVWSE
IGRLDSQWRRKGAPKVAVIGCMAQRLGSKFMDRFKSVCLVAGPRNLGKVPEALSNIAKNE
ERVLLLDDPRELSDLDCPPLRRDNPWRAYITIAHGCDNFCTYCIVPFTRGRFRSRAPEEI
FKEIDFLVADGVREIILLGQNVNSYGADFDNGYRFSNLLRDVASDERVDLVRFLTSHPKD
FTEDIVDVMASNSKICPAINLPIQSGSDRILSLMNRGYTVEQYAKIVETIRNKLEEVAIT
SDLIVGFPGETEEDFNASVDALKRFRFDLVHTAAYSPREGTAGAKMKDQLSEEEKYRRLN
IVNELQNKISYEINASLKGKKYKVLLDSLPPKGEGLLQGRTPTDKVVLVEGDPGLLGKFV
EVSITEAEHWCLRGKLEKIIG
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
gtgaatagttacgcgataaaagtatatggctgccagatgaatgtatatgatgcagaacgg
ctcaggaccgctatggcaaaggaaggattcagcgaggtgtctttggaggaaaagcctgag
ctggtgatatttgtcacgtgcagcattagagagaaggcagaacagaaggtttggagtgaa
ataggaaggttggattcccagtggagaaggaaaggggcacctaaggtggccgttattggt
tgtatggctcagaggctgggaagcaagttcatggataggttcaagagcgtttgcctggtt
gcgggtccgagaaaccttggaaaggtccctgaggctctttccaacattgcaaagaacgag
gagagggttttgttgttggatgacccaagggagctttcggatctagattgccctcctttg
aggcgggataacccttggagggcttatataactatagctcacggctgtgacaatttctgc
acttactgcatagtgccttttactagaggcaggttccgttccagggctcctgaggaaatt
ttcaaagaaatagattttctggtggctgacggagtaagagagataattctgctgggacaa
aacgtcaactcttacggtgccgattttgataacggatataggttttccaatttgcttaga
gacgtagcctcggatgaaagggtggatctggtgaggttcttgacctcccacccaaaggat
tttacggaagacatagtggatgttatggcatcgaattcgaagatctgtccagccataaat
ttgcccatccagtcaggaagcgacagaattctatctttgatgaacaggggctatacggtt
gagcaatatgcgaaaatagttgagacaataagaaacaagctggaagaggttgccataacc
agcgacctgatagtaggttttccgggagaaaccgaagaggatttcaatgcttcagtggat
gccctcaagcgttttcggttcgaccttgtgcacacagcagcatattcgcctagggaggga
accgctggggccaagatgaaagaccagctttcagaggaagaaaaatataggcgtctcaac
attgttaacgagctacaaaacaagatatcttatgagataaatgcaagtttgaagggcaag
aaatataaagtgcttttggacagtttgccgcccaaaggtgaagggttgttgcagggaagg
acacctacagacaaggtggttttggtggaaggagaccctggacttctgggtaagttcgta
gaggtgagcataactgaagcagagcactggtgcctccgaggcaaattggaaaagatcatt
ggttaa
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