KEGG   Thermovirga lienii: Tlie_1425
Entry
Tlie_1425         CDS       T01644                                 
Name
(GenBank) signal recognition particle subunit FFH/SRP54 (srp54)
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
tli  Thermovirga lienii
Pathway
tli02024  Quorum sensing
tli03060  Protein export
tli03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:tli00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Tlie_1425
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Tlie_1425
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Tlie_1425
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tli02044]
    Tlie_1425
Enzymes [BR:tli01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Tlie_1425
Secretion system [BR:tli02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Tlie_1425
  Eukaryotic Sec-SRP protein
   Tlie_1425
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 CbiA AAA_17 AAA Zeta_toxin PolC_DP2_N AAA_33 MutS_III DNA_ligase_A_N ATPase ResIII AAA_31 AAA_14 Thymidylate_kin AAA_18 cobW
Other DBs
NCBI-ProteinID: AER67151
UniProt: G7V6W2
LinkDB
Position
complement(1494954..1496294)
AA seq 446 aa
MLDTLKKRFEKALGLLKNKGKLTEEDVSEAVREVRRALLEGDVSLKVAKELTQKIKERAT
QREVLDSITPAQQIQAIVYEELVNLMGGKTSKGIVFAPKPPTVCMMVGLQGAGKTTTCVK
IAKKLKGGHKPLVVACDLKRPAAVEQLQILANTAGVGFFGPKAGEGDLKKLIRDAMEYAA
SRLHDVIILDTAGRLHIDDELMRELVEIKEIASPTEIMLVLDAMTGQEAIRVAEAFHGEL
ALTGLILTKMDGDARGGALLSAKAVADVPVKYIGVGEKLDDIEVFDPEQMAQRILGMGDL
KALAEKVKEAAEGVDMEKVAKSLTKGKLTMEDLLQQIRQIKRMGPLEKIVEMLPGGGKIK
ELAGSEMDDKRLKHIEAVILSMTPEERRNPKIIKGSRRKRIAYGSGTSVQMVNQVLSYHK
NMNEIFKQLKGRKGKGFRLPKGLPFR
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgttagatacccttaaaaaacgatttgagaaagcactaggccttttgaaaaacaaagga
aagctgacggaagaggacgtatccgaagctgttagggaagtgaggcgcgcccttctggag
ggcgacgtaagccttaaggttgccaaggaactcacccaaaaaataaaagaaagggccacc
cagagggaagttttggattccataactcccgctcagcagatacaagccatagtatacgaa
gagcttgtaaatttgatgggaggtaaaacgtccaaaggtattgtttttgcccctaagcct
cctacggtctgcatgatggtcggattgcaaggagcgggaaagaccaccacctgtgtgaag
atagctaaaaagctcaagggaggccataaacctttggttgtagcttgcgatttgaagagg
cctgctgcggtagaacagctgcaaattttggcaaacactgcaggggtggggttctttggt
cctaaggcaggtgaaggtgatcttaaaaagctcatcagggacgctatggaatatgctgcg
tcaaggttacatgatgtgatcattttggacactgcgggtcgattgcatatagatgatgaa
cttatgcgagagctcgtagagataaaggagattgcaagtcccacggagattatgttggtc
ttggatgccatgacggggcaagaggccataagggtcgcggaggccttccatggcgagctg
gctttgactggattgatcctgacaaagatggacggcgatgccaggggaggcgctttgctt
agcgcaaaagccgtggcggatgtgccagtcaaatatataggtgttggcgagaagctggat
gatatagaggtttttgatccggaacagatggcccaaaggattttgggcatgggcgacctt
aaagccctggcggagaaggtaaaggaagctgccgagggcgtggatatggaaaaggtcgca
aagagcctcactaaaggcaaattgaccatggaagatttgcttcagcagataagacagata
aagcgcatgggacccctggagaagatcgttgagatgcttccagggggaggaaaaattaaa
gagcttgctggtagcgagatggacgacaagaggttaaaacacatagaggccgtgatccta
tcgatgactcctgaggagagaagaaatcccaagatcataaagggcagcaggaggaaaagg
attgcttatggatccggtacatcggtccaaatggtcaaccaggtcctaagttatcacaag
aacatgaatgagatatttaagcagcttaagggacgcaagggcaaaggatttaggctccca
aagggattgccctttaggtag

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