Tuanshanicoccus lijuaniae: I4Q36_04880
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Entry
I4Q36_04880 CDS
T11390
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
tlj Tuanshanicoccus lijuaniae
Pathway
tlj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tlj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I4Q36_04880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tlj03400
]
I4Q36_04880
Enzymes [BR:
tlj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
I4Q36_04880
DNA repair and recombination proteins [BR:
tlj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I4Q36_04880
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
AAA_22
nSTAND3
T2SSE
AAA_28
AAA_12
UvrD_C
AAA_16
DUF473
AAA_29
NPHP3_N
AAA_18
RsgA_GTPase
Mg_chelatase
AAA
cobW
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QQA38011
LinkDB
All DBs
Position
1109452..1111920
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AA seq
822 aa
AA seq
DB search
MSEVLIVGQLDAIYFENPTNLYKVVRIKVDDEMTEVLKESEIVCTGQFATLHYDTQYEFY
GNFTTHPKYGDQFAVKRYQQLAPTSEQGLVDYLSSDRFKGIGVILAQRIVETLGMEAIER
IIQDGDVLKTVKGMTTQKQKDLREALLKFQGTERVFMQLSEWGFSPKFADKIYQKYKSAA
IETIKENPYQLVVDIEGIGFSKADLLAEILGIEPDSLERIVAAYYTTVLEYCYQNGDTYL
LEGACRQQTRKLLESARPYLIDDALMDSALDKAIMDKKLIRLLDGLMIPSLYFAEIGIAE
RLFKHIQFAQIEHFEESLIDEAIQEVIHVTGIQYDNHQQQALKLAIQSPCSIITGGPGTG
KTTLVKGLITLHSILHDYQLSSIHKYGDFQPILLAAPTGRAAKRMNEMTNLPAQTIHRMI
GYTRESNIEDFSNPVELDGKILIVDEMSMVDTWLMNWLIQAIPFHLQVVFVGDRDQLPSV
GPGKVFNDLITSHSLPTIKLEKVYRQGADSTIISLAHEIRLGKIPADLLEKQIDRSFIPC
SSNQVADVVRQIVEQARSKQYDSTNMQVLAPMYKGPAGINLLNEQLQAIMNPPRRGLREI
TYFEQTFRVGDKVLQLVNNAEADVYNGDIGKIVAIFHKNETESNVEEILVEFETRELTYK
RSDLDQLTLAYCCSVHKAQGSEYPLVILPLVDLHSRLLRKDLLYTAVTRAKQRLVLVGNP
NSFVKAATSATIPRATFLKDMIQLKMKQREQLKAALQPTKSEKDAVVEQESKSTAPVATA
EVSTELKKTAQTDKAIDSLTEETIWQIDPMIGMENLTPYDFL
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgaagtattaatcgttgggcaattagatgccatttattttgaaaaccctacgaat
ttatataaagtagtccgcattaaggtagatgatgagatgacggaagtattaaaagagtca
gaaatcgtttgtactggacaatttgcaacgctacactatgatacacagtatgaattttac
ggtaattttacgacgcatcctaaatatggtgaccaatttgcggtaaaacgctatcaacaa
cttgcccccacttccgaacagggactagtagattatttatcaagtgaccgatttaaggga
attggagtcattttagcacaacgaatcgttgaaactttagggatggaggcaattgaacgt
attattcaagatggtgatgtcttgaagacggttaaagggatgacgacgcaaaagcaaaaa
gacttgcgtgaagcgttattgaaattccaaggtactgaacgtgtctttatgcaattaagt
gaatggggcttttcaccaaagtttgctgacaaaatttatcaaaaatataagagtgctgcc
atagaaacgattaaagaaaatccttatcaattagttgttgatatagaaggtattggcttt
tctaaagcagacttattagcagaaatactagggattgagccagattcattggaacggatt
gtggctgcttattatacaacggttttagaatactgttatcaaaatggtgatacctaccta
ttggaaggagcgtgtcggcagcagacgcgcaaattattggaatctgctcgcccctattta
attgatgatgcgttaatggattctgcgctcgataaagcgataatggataagaaacttatt
cgtttattagatggtttgatgattccaagtctatactttgcggagatagggattgcagaa
cgattatttaaacatatccaatttgctcagattgaacactttgaagaatcattgattgat
gaggcgattcaagaagttatccatgtaactggcattcagtatgacaatcatcaacaacaa
gcattaaaattagcgatacaatcaccttgttcgattattactggaggacccggtacgggt
aagacaacgcttgtaaaaggtttgattaccttacattcgattttgcatgactatcaatta
tcgtctattcacaaatatggtgattttcaaccgattttacttgcagcgccaactgggcga
gcggctaagcggatgaatgagatgaccaatttaccggcacagactattcaccgtatgata
ggatatacacgtgagagtaatatcgaagatttttctaatcctgttgaattggatggaaaa
atattaattgttgacgaaatgtcgatggtggatacttggctgatgaattggctcatacaa
gcaataccatttcatttgcaagttgttttcgttggagaccgtgaccaattaccctcggtt
ggaccgggtaaagtgtttaatgatttaattacgagtcatagtttaccaactatcaaatta
gaaaaagtttaccgtcaaggggcggatagtactattatatccttagcacatgagattagg
ctaggtaagattcctgctgatttattagaaaaacaaattgaccgtagctttataccttgt
tcttccaatcaagtggctgatgtggtccgtcaaattgttgaacaggcacgcagtaaacag
tatgacagcaccaacatgcaggtgttagcaccgatgtataaagggccagcggggattaat
ttacttaatgagcaacttcaagcgattatgaatccaccgcggcgtggcttgcgagaaatt
acgtattttgagcaaacatttcgtgtcggtgacaaggtattgcagctagttaataatgct
gaagctgatgtgtataatggtgacatcggaaaaattgtagcgatttttcataaaaatgaa
accgagtcgaatgttgaagagatattagtggagtttgaaacgcgggaactaacttataaa
cgttctgacttagatcaattaactttggcatattgctgttcggtgcataaagcacaaggg
agtgaatatccattagttatcctaccgttagtagatttgcattcacgcttattgcgtaag
gacttattatacacagccgtaacgcgtgctaaacaacgcttggtattagtcggcaatcct
aatagttttgttaaagcagcgactagtgcgaccattccacgagcaacttttttaaaagat
atgatacaactaaaaatgaaacaacgagaacaactaaaagcagcattgcaaccaacaaaa
agtgaaaaggatgcagtagtagagcaagaatcgaaaagcacagcacctgttgcgacagct
gaagtatcaactgaacttaagaagacagcgcaaacagacaaagcgattgatagcttaaca
gaagaaactatatggcagattgacccaatgattggcatggaaaacctaacaccctatgac
tttttataa
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