Tuanshanicoccus lijuaniae: I4Q36_07120
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Entry
I4Q36_07120 CDS
T11390
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
tlj Tuanshanicoccus lijuaniae
Pathway
tlj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tlj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I4Q36_07120 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tlj03019
]
I4Q36_07120 (rnr)
03016 Transfer RNA biogenesis [BR:
tlj03016
]
I4Q36_07120 (rnr)
Enzymes [BR:
tlj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
I4Q36_07120 (rnr)
Messenger RNA biogenesis [BR:
tlj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
I4Q36_07120 (rnr)
Transfer RNA biogenesis [BR:
tlj03016
]
Prokaryotic type
tRNA degradation factors
I4Q36_07120 (rnr)
BRITE hierarchy
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Ortholog
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GFIT
Other DBs
NCBI-ProteinID:
QQA36580
LinkDB
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Position
complement(1624291..1626621)
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AA seq
776 aa
AA seq
DB search
MSLSKFEEDILNFLMEHADKSYSMDELASILSLMGIKKYKKLVKAMAFLERVGEVELVKG
YKFRSVRQPAKTVVGTFRANSKGFGFITYDDGEADLFVPPGNSADAMHGDTVEAKVLRQV
NPQTGKGSEAVVLRVVERSATQMVGEFFAYDQAMRQSTGYLGYIRPQGDYSDQVTIYVLP
EGIHPVEHSICIVKIKDYPTVENPNKLIGYVAKEVGHKDAPGVDILAVLYQFNIPHEFPD
NVIKEAEAVPMTIQADELAGRRDLRDWLIITIDGADAKDLDDAISLEKNADGTYQLGVHI
ADVSYYVTEGSALDREAFERGTSVYLTDRVVPMLPQRLSNGICSLHANEDRLTLTCEMTI
DAYGAVIDYAIYPSIINSSYRMTYDNVNKMLAGDDVLNREYNEIVDMVEEMAELHHILEA
KRHRRGALDFDAPEAKIIVDESGHPLEIQLRERQVAERLIESFMLCANETVAQEFTKRQL
PFLYRIHEQPKEEKMLRFAEFVTSFGMVLRGNVANIEPKQLQQALKAIKGQPYEPVVSTM
MLRSMQQAKYSESPMGHYGLAAADYTHFTSPIRRYPDLIVHRLIRRYLTDELTDAQKEQL
TERLVEIAEHSSKRERRAVEAERETDAIKKTEYMLDKVGQEFEGRITSITSFGMFVGLPN
TIEGLIPIKALMDDYYEFNAQHLVLVGRNRGTIYRIGQQVTVEVEQVSVSDRTINFKLID
AVPMTDMRPIVLDSKKKNKKGHKQQEKATHFVKDKQKKAKGKAKASRTAFKKGKRK
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgtcattatcaaaatttgaagaggatatcttaaatttcttaatggaacatgctgataag
tcctatagtatggatgagttggcttccattttgtcattgatgggtatcaagaaatataaa
aagcttgtaaaagcaatggcttttttagagcgagttggagaagtggagttagttaaaggc
tataaattccgttccgtgcgacagccggctaaaacggtggttggtacatttagagctaat
agtaaagggtttggttttattacgtacgacgacggggaggctgatttgtttgtcccaccg
ggaaattcagctgacgcgatgcatggcgatacggtagaagcaaaggttttacgacaagtg
aatccgcaaacaggtaaaggttctgaagcggttgtgctgcgtgtagttgagcgttcagcg
acgcaaatggtaggtgagtttttcgcttatgaccaagcgatgcgccaatcgacaggctat
ttaggatatattcgtccacaaggcgattatagtgatcaagtgactatctatgtgttgcca
gaggggattcatccggtagagcattcgatttgtatcgtgaagattaaagattatccaact
gtagaaaacccgaataaactaatcggttacgttgctaaggaagtcggtcataaagatgca
ccaggtgttgatattttagcggtgttgtatcaatttaatattccgcatgagtttcctgat
aatgtgataaaagaagctgaagcggtgccgatgacgattcaagccgatgagctggcaggg
cgtcgtgatttgcgtgattggttaattattacgattgacggtgcagatgctaaggacttg
gatgatgcgatttcgctagaaaaaaatgcagatggcacctatcaactaggggtgcatatt
gcagacgtgtcgtattatgtcactgaaggtagtgcgttggaccgtgaagcttttgaacgt
gggactagtgtctatctgacagaccgtgtggtgccgatgttgccacaacgtttgtcgaat
ggtatttgttcgttgcatgccaatgaagaccggttgaccttaacgtgtgagatgacgatt
gatgcgtacggagccgtgatcgattatgcgatttatccaagtattatcaattcatcctat
cgcatgacatatgacaatgtgaataagatgttggcgggcgacgatgtgctgaaccgtgag
tataatgagattgtcgatatggttgaagaaatggcagagttgcatcatatattagaagcg
aaacgtcatcgccggggggcactggatttcgatgcgcctgaagcgaaaattattgttgat
gaatcgggtcatcctttggaaattcagttgcgtgagcgtcaggtagcggaacgcttaatc
gagtcattcatgttatgtgccaatgaaacggtagcacaagaatttacaaaacgtcagtta
ccatttttatatcggattcatgaacagcccaaagaagaaaaaatgttacgctttgcggaa
tttgtaacctcttttgggatggtgttgcgtggcaatgtggccaatatcgagccaaaacaa
ttacaacaagcattaaaagcgataaaagggcaaccgtatgaaccggtcgtttcgacgatg
atgttacgcagtatgcagcaagctaaatatagtgaatctccaatgggacactatggtttg
gcggcagcagattatacacactttacctcaccgattcgtcgttatccggacttaattgtg
catcgattaattcgccgttatttgacggatgaactaacggatgctcaaaaagagcagtta
actgagcgattagttgaaattgctgaacattcgtccaaacgagaacgtcgagctgtagaa
gcagaacgcgagacggatgcgattaagaaaactgaatatatgttggataaggttggacaa
gagtttgaggggcgcattacgtcgattacctcttttggtatgtttgtcggcttgccgaat
acgattgaagggttaattccgattaaggctttgatggatgattattatgagttcaatgca
cagcatttagtattggttggtcgaaatagagggacgatttatcgcattggtcaacaagtg
actgttgaagtggagcaagttagtgttagcgaccgtacgattaattttaaattaattgat
gcggtaccgatgacggatatgcgtccgattgtattggattcaaagaagaaaaataaaaaa
ggccacaaacagcaggaaaaggcgacgcattttgtcaaagataagcagaaaaaagcaaaa
ggtaaagccaaagcatcgcgtacagcgtttaaaaaaggcaaacgtaagtaa
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